Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2161 ATTGCCGCTCATCTCATCGCCATCATTCATCTCTGCGCCATCGCAAGCAACACCGCTTTCAATTTGGCTCATCTCCTCGCCGTGGCAAGCAATGCCATTGTTGCTGCCTTCACAAGCTTCTACAGTTTGGTTTCGCGATCTCTATCACTTCTAATAGAGCAACAAAGGTCAGACATAAGCAACTTTGGAAAATCTTGTCAGCAAGCAGAAGATGCTCTTTCACAAGGCATGGACAAACTTCAACAAATGGTTTTAGAATCTGTAGCAGCAGGACAACTTGATGAACAAACTAACACTCCAAACATGTCTACGGCAATAGAGAGATTGGCAGTTTACAAGGGCGCCATGATGCTTCAGTCCCTCAAACCCGTGAAGCAGTTCAGCCACCACGTTTGCTCCTTTGCCATCTACATCCACGACATGTCTCGCCAGATCTAG 438 0.4658 IAAHLIAIIHLCAIASNTAFNLAHLLAVASNAIVAAFTSFYSLVSRSLSLLIEQQRSDISNFGKSCQQAEDALSQGMDKLQQMVLESVAAGQLDEQTNTPNMSTAIERLAVYKGAMMLQSLKPVKQFSHHVCSFAIYIHDMSRQI* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2161 145 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 50 111 - -
Amo20g2161 145 PANTHER TRANSCRIPTION FACTOR TGA9 50 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2161 Amo-Chr20 97776642 97778098 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2161 51 109 Calmodulin-binding Proteins AT5G10030 59.322 9.76e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2161 K14431 - thj:104799164 77.0257