Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2146 ATGTTAGCCGAAAGTTATATCATTCACAAGCATCAGGACAACAATATGATGAGTTTTCACCTTCACATACCGCATCTCCATTTCAGCCACCACGAGAAGAAGGAGGATCTGAAGGACATACCGAAGGGGTGCTTGGCGATCATGGTGGGCCAAGGAGAAGAGCAACAGAGGTTTGTTATTCCTGTTATATACTTCAACCACCCACTCTTCTTGCAGCTCCTCAAAGAAGCTGAAGACGAGTACGGTTTCGATCAGAAAGGACCTATCACCATACCCTGCCACGTCCAACACTTTCGCACCGTCCAGGATATCATTCATAGGGACAAATCTCACCACTTCCATCACCACCACCACCACCATAATCATCATCATGCCTGGTGCTTCAAAGTTTGA 393 0.4656 MLAESYIIHKHQDNNMMSFHLHIPHLHFSHHEKKEDLKDIPKGCLAIMVGQGEEQQRFVIPVIYFNHPLFLQLLKEAEDEYGFDQKGPITIPCHVQHFRTVQDIIHRDKSHHFHHHHHHHNHHHAWCFKV* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2146 130 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 18 122 - -
Amo20g2146 130 Pfam Auxin responsive protein 34 102 IPR003676 GO:0009733
Amo20g2146 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 18 122 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2146 Amo-Chr20 97017509 97019343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2146 39 99 Calmodulin-binding Proteins AT5G20810 54.098 7.58e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2146 K14488 - gmx:100526867 194.126