Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2129 AGTGGAAACTTGGCTGCTATTATAATTTATAAGGGTCCAATACAGAGTCCCAAAAAACCAGTATTTGTTCATAGCAAACCTACAAAAATGGATACCCAAGTAGCGCCATTTTTCCTTCTCCTCCTCCTTCTCTTCACCATTTTGGTATCTGGTACTGAATCAGCATCGTGCCCGTTTAATCTCAACTACGTTGACACCTTATCATGGGACACATCAACATGCAGAGACCCAATCGACACACAACACTGCTGCCAAACCCTGTTGAGTCTTATCGGCATTGGACTCTCTCAGCACCTCAAACAAACCTCCCAGTTCCAACTCCAGGATAACAATACTTCCGCATCTTGCTTATCTGAATTCAGATCCAAGCTTTCACCCTTGTTGCTGAACACATCTATGGTGTCCACATGCTTCCAGAACTCGGATTTCGTCTCGAATTCTTCGAGTTGTGCCGGGATTGAGAACATCCAAGATTGGAGGCAGAAGGTGGGGTTAATCTCCCCACTGGACACTTCTTGCAGTGGCGACATGAATGGCCAAACGCAGTGCAGCATTTGCACGGACGCGGGATTCAAGGTCACTGCAGACTTGAACCAAAAGGACCCAAATTCGACCAAATGCTTCTACTTCACAATCTTGTATGCTGCTGGTGTTGTTAACCAGTTTGGTCCAAGCAATTTGGGCACGGCTTCTTGCATTCTGGGCTTGCCGCTGTCCACGAAGAAAGGGTCGTGGAACAAGGAACAAGTTTTGAAATTGGTTTTTGGGATATTGGGTGCTCTTGGTGGTGTTATTCTCACTTCGGTTCTGATTGTTTTGTTTAGAAAGTGGGATAGGAGGAGGAGGGAGAACCTTTATCACAGGTCAATCGAAAACAGCGTTAGGAACAGCGTTTTGCCCAATGCGGGGGCGAAATGGTTTCATATTTCAGAGCTTGAACGAGCCACTAACAAGTTTTCACAGAGGAATATGATTGGTCAAGGTGGTGATGGGGTAGTGTACAAGGGGACTCTTTCAGACGGCACTTTGGTTGCGGTTAAAGAGATTCTGAACTTGGAAAGCAAAGGGGATGAGGAGTTTTGCTATGAGGTAGATATCATAAGCAAAATAAAGCATAGAAATCTTCTTGCTCTTCGGGGTTGTTGCGTCACGAGCGATAACTTGAAAGGTAAGAGGAGGTTTCTGGTTTATGATTATATGCCTAATGACAGCCTCAGTTACCAATTGTCCATTGCTGGTGCTAATAGGCTAACATGGCCACAAAGGAAGAGCATAATTCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTACGAAATCAAACCCCCGATTTATCACCGCGACATTAAAGCGACCAACATACTTCTTGATAGCAAGATGAAAGCAAAAGTGGCGGATTTTGGATTAGCAAAACAGGGCAGTGAAGGCCAGTCTCACCTCACAACAAGGGTGGCTGGCACATACGGTTATCTGGCGCCAGAGTACGCGCTATACGGCCAACTAACAGAGAAGAGTGATGTGTATAGTTTTGGAATTGTGATCTTAGAGATCATGAGTGGGAGGAAGGTACTAGARACGACGAATTCGAWTTCAAACGTGGTCTTGATCACGGATTGGGCGTGGACGCTRGCGAAATCAGGTCYGACGGAGGAGATTCTTGATGAGTCAATAAGGGYAGAAGGGCCAGAGAAGATCATGGAAAGGTTTGTTCTTGTTGGGATTCTTTGTGGTCATGCAATGGTTGCGCTTAGGCCTACCATTGCTGAGGCAATGAAGATGTTGGAGGGTGATATTGACATTCCTGAGTTGCCAGACAGGCCGGTACCACTTGGTCATGAGTCGTTTCGATCTTCTCTTCTCTTTGGATTGCAAAGAAGCGGAAGGTCCATGCCATATCTCTCATCTTATGAAACAAATATGACTACGAGCACAATGTAG 1938 0.4541 SGNLAAIIIYKGPIQSPKKPVFVHSKPTKMDTQVAPFFLLLLLLFTILVSGTESASCPFNLNYVDTLSWDTSTCRDPIDTQHCCQTLLSLIGIGLSQHLKQTSQFQLQDNNTSASCLSEFRSKLSPLLLNTSMVSTCFQNSDFVSNSSSCAGIENIQDWRQKVGLISPLDTSCSGDMNGQTQCSICTDAGFKVTADLNQKDPNSTKCFYFTILYAAGVVNQFGPSNLGTASCILGLPLSTKKGSWNKEQVLKLVFGILGALGGVILTSVLIVLFRKWDRRRRENLYHRSIENSVRNSVLPNAGAKWFHISELERATNKFSQRNMIGQGGDGVVYKGTLSDGTLVAVKEILNLESKGDEEFCYEVDIISKIKHRNLLALRGCCVTSDNLKGKRRFLVYDYMPNDSLSYQLSIAGANRLTWPQRKSIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMKAKVADFGLAKQGSEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLETTNSXSNVVLITDWAWTLAKSGXTEEILDESIRXEGPEKIMERFVLVGILCGHAMVALRPTIAEAMKMLEGDIDIPELPDRPVPLGHESFRSSLLFGLQRSGRSMPYLSSYETNMTTSTM* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2129 645 Pfam Protein kinase domain 321 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g2129 645 Gene3D Transferase(Phosphotransferase) domain 1 400 608 - -
Amo20g2129 645 ProSiteProfiles Protein kinase domain profile. 319 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g2129 645 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 39 620 - -
Amo20g2129 645 SMART serkin_6 319 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g2129 645 Gene3D Phosphorylase Kinase; domain 1 281 399 - -
Amo20g2129 645 SUPERFAMILY Protein kinase-like (PK-like) 304 611 IPR011009 -
Amo20g2129 645 PANTHER OS01G0253100 PROTEIN 39 620 IPR045271 GO:0004714|GO:0006468
Amo20g2129 645 Pfam SPARK 53 208 IPR043891 -
Amo20g2129 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2129 Amo-Chr20 95377802 95380261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2129 46 616 Receptor kinase-like Gene Family AT1G11050 52.211 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Amo20g2129 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2129 - - ccaj:109788171 948.347