Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2087 ATGGGTGAAGAATTGAGCTATTGTGAGAAAGTTCGTGCATGGTTCACAAAATCAAAGGCATTTTTGCTAATATTAAGCTTGCAATTTGGGTCAGCGGGCATGTACATTATCACCATGGATGCTCTAAACAAGGGATTGAGTCATTATGTCTTTGTTGTTTATCGTAATGTTGTTGCCACTCTCGCTCTTGGCCCCTTCGCTTTTTTCCTTGAAAGGAAAGTTAGGCCCAAGATGACACCTCGGATATTTGCAGAGATTGTGGCACTGGCTTTTATAGAGATTATACTTGATCAATGCTTCACCTTCCTAGGAATGAAATTAACTTCAGCATCTTTTGCATCTGCTGTGATGAACTCTGTACCCTCCATAACCTTTGTGCTGGCAATCATTTTTAGGTTGGAGCGCATGAACATTAGGAACATAGGATGTCAAGCGAAAGTGACAGGCACTGTGATAAGTCTTGGAGGCGCTATTCTAATGGCAATGTACAAAGGTCCTATTCTTAACATTGTGACGTCATCAACAACCCATGTGGCCCACAATGGGAATAATGCTAACGCCACTGCTGACCAATGGCTCATGGGTGCAATCTTCATTCTAATAGGCTGTGCTGGCTTCTCTGGTTTCTACATATTGCAAGCAATAACATTGAGAAAGTACCCAGCAGAGATGTCCCTAGCCACGTGGGTATGCTTTATTGGTGCAATTCAAAGCAGTGCAGTTACTGCTTACATGGAGCGTGATTCTCCTCAAGTCTGGATTCTGGCTCCTGATTCTAGGCTTCTTGCCTGTTTATATGCGGGAGTAGTAACATCAGCAATACAGTTCTATGTGCAAGGGCTGGTGATTAAAACAACGGGTCCAGTATTTGTGACTGCTTTCAATCCCCTGCGTATGATCATAGTCACAGCCTTCGCTTCCATACTCCTTTCTGAGAAGCTCTACCTAGGAAGTGTTATTGGAGGAGTAGTGGTGGTTGTAGGGCTTTATTTGGTTGTGTGGGGAAAATCTAAAGAAAAGAAAGGCGTAAAACATGCGATGCTGCCACCATCCCCTGAAAAAGAAATCCAACAACAGCAGCTACCAGTTACTGTTCCCAGAAATTTTGATGCCAGCAACAATAATAATAATGATGACGACGATAATAATATGGATCATCAACTTATGGTTGTGGTTGGAATCAAGAACACCGACGTTGAAGCAAGAAGATCATCATCATGTTAG 1224 0.4265 MGEELSYCEKVRAWFTKSKAFLLILSLQFGSAGMYIITMDALNKGLSHYVFVVYRNVVATLALGPFAFFLERKVRPKMTPRIFAEIVALAFIEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERMNIRNIGCQAKVTGTVISLGGAILMAMYKGPILNIVTSSTTHVAHNGNNANATADQWLMGAIFILIGCAGFSGFYILQAITLRKYPAEMSLATWVCFIGAIQSSAVTAYMERDSPQVWILAPDSRLLACLYAGVVTSAIQFYVQGLVIKTTGPVFVTAFNPLRMIIVTAFASILLSEKLYLGSVIGGVVVVVGLYLVVWGKSKEKKGVKHAMLPPSPEKEIQQQQLPVTVPRNFDASNNNNNDDDDNNMDHQLMVVVGIKNTDVEARRSSSC* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2087 407 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020|GO:0016021
Amo20g2087 407 Pfam EamA-like transporter family 31 160 IPR000620 GO:0016020|GO:0016021
Amo20g2087 407 PANTHER WAT1-RELATED PROTEIN 15 368 - -
Amo20g2087 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 163 - -
Amo20g2087 407 PANTHER WAT1-RELATED PROTEIN 15 368 IPR030184 GO:0016021|GO:0022857
Amo20g2087 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2087 Amo-Chr20 88620609 88625862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2087 19 382 Nodulin-like Gene Family AT2G39510 43.956 7.94e-112 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2087 - - ahf:112715649 758.059