Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2073 ATGTTGCTAAGTTCAATATTTCAATTGGGAGGGAGTAAGTTATTTCGAGATTTTCTCCCTATACAGATTCTACTTGCTGTTTCAACCATAGCACAAGTGGGTCTCATCTTCTATGTCCTCATGGCTGGGCTTGAGATGAACTTAGATTTTGTTTTAAGAGCACCTAAGAAGCCCAGAATAATTGCAATTTGCAGCACTCTGATTCCAATGATATTGGGAATCGGAATTTATTCTTTGGTAATAATAGTGGACAAGAAATTCTTAAAAAATAATGTTCCTGTTCTTGCAAACATTCTTGTGGACCTTAAACTTCTCTACACTAGGCTTGGAAAATTGGCATTAACAGTAGCAACACACAATGACTTCTATAATTGGATTATGTTTGCATTGGTGTTTCCATTTCTTGTTAATGGTTATAGAGCAATTTTCTCAATGCCGTGTGTCATAGCTTTTATTCTCTTAAGCCACTTTGTGTTACGCCCTTTGCTAGAGAAGATAGTGGCCAAGAAACCAAACAAGCATGATTGGACCAATTACCAGTTGTCATTTGTGATCATGGGGCTTTTCGCTTGCACGGGGCTTACCGATGTCCTCGGTGTGAATCCCCTCGTCGGGGCGTTGATTTACGGACTTGCCATTCCACGAGGAAGCTTCACCGAGATGTTGATGGAGAGATCGGATGATTTTGGATCTAGATACTTAGCACCCTTGTTCTTTTTCAGTGGTGGCTTGAGGTGCAATGTAGTTAAGATTTTGCAGACTGTAGATTTGGATTTTGTTGTTATAACTGTAGATTTGGGTTTTGTTGTTATAGTGATCTTGTCTATCTTCACAAAGATGGTTACAACATTTGCAGTTACTCGCTACTATGGTATGCCTTTCAGAGAGAGTTTGGCTTTTGGGTTGCTTATGAACACCAAAGGCGTCTTGTCACGCATAGTGCTCAACATTGCATGGGATAATAAGGTGGTTAAATTGATTAGAAAAATGCTATATATTTTTTCTGTTCATCTAATCTTGAGTATATATAGCATTGTTGGACATACTTATAAGTGCATACGCATTCTCAATCATGACGCTTACTATTCTGATAATGACTTTCATGGTGTCTCCAATAACGTCATTTACAGGCCAAAAACAGCCTATAGGATGAACATGCTAAGGACCATACAAAACCTAGGGTTTCAAACAGAAGTTCGAATCTTGGTTTGTGTGCACAATCCTCACCATGCCAGTGGAATGGTGAATATCCTAGAGGCCTTAAGTGGTATCAGTGTCTCCTCTTTGCGAGTGACAGCAATTCAACTCGTTGAGCTCAAAGGTCGTGTCACTAGCCTTGTCTCTGTTCAACTCGAGCATCAAAGCTCGCTCGGATTCTCACAATCACAATCACAATCATCTAAGGACATGGAAACGATAGCAAGTCATTTCCATTTCTTTGCACAAGTGCATAGTGGCAACCATGCTGAAACCAGCATGATCATGTCACCTTTCGCGACAATTAACCGTGACATATACAATCTAGCAATGGAGAAACAAACATCATTGGTACTCCTTCCTTTTCGCAAGCACTGGAGCTCCGACAGCAACCTAGAGGTAACTAAAGAGGTGTTTGGCGAGATAAACCAGAATGTGATGAAAGATGCACCATGCTCTGTGGGGCTCTTCATTGATCGCGGCCTTAATTCATTGTTGAATGCCAATTTGCACATCATCATGTTATTCATTGGGGGTCCTCATGATCGCGAAGCCTTGGCTATTGCGTGGAGGATGGCAGGACAGCATAGGATACGGATACAACTCACTATGGTGAGGATTATTTTGTGTGGCAAGGCTGCAATGGAGGATCAAAAAAAGGAATCTGGCCATGAGGAACTACTATCAGCAGTGCTAGATAAGAATAAGGAACGAGAGTTGGATGATAGCYGTGTGAATAATTTTAGGATTATGGGAGTGAACAATAAGGATACAATAAAGTATGAAGAGAGATATGTGGAAAGTGATGATGATATCCCTAGAGTGGTTAATGAATTTGATCAAAAGCGTTATGATTTATATGTTTTGGGACAAGGGAAAGGTAGGCACTCAAGGGTGTTGTCCGAAATGTTGGATTGGACTGATTTCCCTGAACCAGGTGTTATTGGGGACTTAGTGGCATCAAATAGCTTTGGTTCCTACTCTTCTGTGCATGTTATACAGAAATATGGGTATGGGGGAATGGAATTTGGTAAAAATTATGAGAACAACCGTAGTTGTCATCCTCCTATTTGCAAACCACCTTCAATGACAAGATCATTAAGTAGAATGTTT 2310 0.4043 MLLSSIFQLGGSKLFRDFLPIQILLAVSTIAQVGLIFYVLMAGLEMNLDFVLRAPKKPRIIAICSTLIPMILGIGIYSLVIIVDKKFLKNNVPVLANILVDLKLLYTRLGKLALTVATHNDFYNWIMFALVFPFLVNGYRAIFSMPCVIAFILLSHFVLRPLLEKIVAKKPNKHDWTNYQLSFVIMGLFACTGLTDVLGVNPLVGALIYGLAIPRGSFTEMLMERSDDFGSRYLAPLFFFSGGLRCNVVKILQTVDLDFVVITVDLGFVVIVILSIFTKMVTTFAVTRYYGMPFRESLAFGLLMNTKGVLSRIVLNIAWDNKVVKLIRKMLYIFSVHLILSIYSIVGHTYKCIRILNHDAYYSDNDFHGVSNNVIYRPKTAYRMNMLRTIQNLGFQTEVRILVCVHNPHHASGMVNILEALSGISVSSLRVTAIQLVELKGRVTSLVSVQLEHQSSLGFSQSQSQSSKDMETIASHFHFFAQVHSGNHAETSMIMSPFATINRDIYNLAMEKQTSLVLLPFRKHWSSDSNLEVTKEVFGEINQNVMKDAPCSVGLFIDRGLNSLLNANLHIIMLFIGGPHDREALAIAWRMAGQHRIRIQLTMVRIILCGKAAMEDQKKESGHEELLSAVLDKNKERELDDSXVNNFRIMGVNNKDTIKYEERYVESDDDIPRVVNEFDQKRYDLYVLGQGKGRHSRVLSEMLDWTDFPEPGVIGDLVASNSFGSYSSVHVIQKYGYGGMEFGKNYENNRSCHPPICKPPSMTRSLSRMF 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2073 770 Gene3D - 9 350 IPR038770 -
Amo20g2073 770 PANTHER CATION/H+ EXCHANGER 3 9 350 - -
Amo20g2073 770 PANTHER CATION/H+ EXCHANGER 3 373 750 - -
Amo20g2073 770 PANTHER CATION/H + ANTIPORTER 9 350 - -
Amo20g2073 770 Pfam Sodium/hydrogen exchanger family 21 325 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo20g2073 770 PANTHER CATION/H + ANTIPORTER 373 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2073 Amo-Chr20 87223362 87226592 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2073 12 735 Antiporter Super Family AT2G13620 30.749 2.75e-111 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2073 - - ahf:112711086 1262.28