Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2049 ATGGGGCCTGGTCTGACTTTTGTGATCGAGGCTCAGCCTTATCTGAATGCTGTTTTGATGCCACTTGGGCTTAAAGTGATGTGCTTCAAGGCCTGCACACACTACCCAACTCTCTTTGATCATTTCCAGAGGGAGCTTCGAGAGGTTCTCCAGGACCTTCAGAATAAGTCCTTGCTCCAAGACTGGCACCAACCGCAATTTTGGAAGCAACTTAAAACTCTCGCCAATTCAGCATCGAGCAGTGGCCAGAAAGATAGCCTTCCCCTTCCCAATACCGTCCAAGGTGTTTTAGGAATGGACTTGGACAAGGAGGAATTGGATGCTGTTCCTAGGCCTCTGGATGATGCTTCTGACCCCTCAAGACCGATTGAGTTCTTGGTTAACCATAGCCAGCCTCAGCAAGAATTCTGTGACACCATTTGCAACTTAACTGCCATCAGTACCTCTACCGGTATTCTTCTTTTTCCATTTTCTTACGAGATATCCAAAGATATAGTAGGAAAATATCCTGCCAATTTGATAGATGTTGATTACCTCAATAAGGAAAATGGCCATCAGAGGGATGCTGGGTCCACTGCATCAACAGCTATGGTGTTGGGCGACCGAATTCTTGTTGCAAATGTTGGCAATTCTAGAGTAGTTACATCCAGAGCTGGTACAGCTGTTCCTTTGTCTATCGATCACAAACCTGATAAATCTGATGAGCGTCAAAGGATTGGAGGACGCAGGGGGATTCATAAGTTGGGCAGTTTACTAGCTGGTATTGATTCAGGGACATGGAGGGTTGGTGGTGTTCTTGTTGTTTCCCGGGCATTTGGAGATAAACTTCTTAAACCATACGTTGTTGCCGACCCAGAAATTAAGGAAGAAGAAATAGATGGTGTGGATTTTATCATAATCGCCGGTGATGGTCTTTGGAATGTCATATCAAACAAGAGTATTGCAACAGAAATGCAGAGTGAGTCTAAATGGAAGCAGATGGGAGAATTAGCTATGTCTAATGGAAGGTTAGATATGGCTGAGGATTGTTGA 1032 0.4467 MGPGLTFVIEAQPYLNAVLMPLGLKVMCFKACTHYPTLFDHFQRELREVLQDLQNKSLLQDWHQPQFWKQLKTLANSASSSGQKDSLPLPNTVQGVLGMDLDKEELDAVPRPLDDASDPSRPIEFLVNHSQPQQEFCDTICNLTAISTSTGILLFPFSYEISKDIVGKYPANLIDVDYLNKENGHQRDAGSTASTAMVLGDRILVANVGNSRVVTSRAGTAVPLSIDHKPDKSDERQRIGGRRGIHKLGSLLAGIDSGTWRVGGVLVVSRAFGDKLLKPYVVADPEIKEEEIDGVDFIIIAGDGLWNVISNKSIATEMQSESKWKQMGELAMSNGRLDMAEDC* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2049 343 ProSiteProfiles PPM-type phosphatase domain profile. 112 343 IPR001932 -
Amo20g2049 343 PANTHER ALPHABET, ISOFORM E-RELATED 174 314 - -
Amo20g2049 343 Gene3D - 157 342 IPR036457 -
Amo20g2049 343 CDD PP2Cc 173 338 IPR001932 -
Amo20g2049 343 SMART PP2C_4 90 340 IPR001932 -
Amo20g2049 343 Pfam Protein phosphatase 2C 181 323 IPR001932 -
Amo20g2049 343 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 174 314 - -
Amo20g2049 343 SUPERFAMILY PP2C-like 183 320 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2049 Amo-Chr20 85855413 85858063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2049 175 312 PP2C-type Phosphatase Gene Family AT1G43900 61.594 6.28e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2049 K17506 - aip:107625008 254.218