Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2046 ATGGAAAATTTATGTGGTGCTAGCTTTGGTAAGATGATGAATAAGGCAAGGCCTTATTTGCTAACTGTGGGATTGCAATTTGGGATGGCAGGGACGTACCTCTTCACCATGGCTAGCCTTAACTATGGAATGAATCGTTTGGTGTTCATTGTTTATCGCAATGCCATAGCTGCATTCTCCCTTGCCCCTTTTGCATTGATTTTTGAAAGGAAAGTGAGGCCAAAGATGACAATCTCTGTATTCTTCCAGATAGTGGCTCTCGGATTTCTAGAGCCGGTGATTGATCAAGGGTTCACTTTCTTGGGGATGCAATACACTTCAGCTTCATTTGCATCAGCTGTTATGAACGCCGTGCCCTCTGTCACCTTCGTGCTTGCAGTGCTTCTCAGGATCGAGCGCATAAAAATAAAGGAGATAAGGAGTCAAGCAAAATTGCTTGGAACCTTAGTAACTTTTGCAGGGGCTATGCTGATGACGCTTTACAAAGGCCCTGCAGTCAACTTGTTTCATTCATCAAACACGATGCATCAGAATGCTCAAACTCACTCTCTTGATTCTCACAAAAACTGGATTACCGGCACACTTTTCATATTCCTTGGTTGTATTGCTTGGTCTTGTTTCTACATTTTGCAGTCCATAACAGTGAGAAGGTACCCAGCAGAACTATCACTATCATCGTTGATATGCTTGGCGGGTACTTTTGAAAGTGCAGTGGTTGCTCTCATTTCAGATCATCGCCCTCAAGCGTGGGCAATTGGCTGGAACTACACCCTCTACGGTCCTCTCTACACTGTTAGAATAGTGAGTTCAGGAATTGCATATTATATACAAGCGTTAGTAATGCAAAGCAGAGGACCAGTGTTTGTAACGTCTTTTAATCCGCTTTGCATGATCATCGTTGCTGCTTTGGGATCCTTCCTACTAGGAGAACAGCTCCACCTTGGAAGCATTATTGGAGGTATTATTATCGCAGTAGGGCTTTACTCTGTGGTGTGGGGTAAAGGAAAAGACTACACAGACCTCACAACATCATCAACAACAATAAAGGAAACTGAAACTCAGCAGCTTCCAATTACCTCACCAACTGAAAAATAA 1095 0.432 MENLCGASFGKMMNKARPYLLTVGLQFGMAGTYLFTMASLNYGMNRLVFIVYRNAIAAFSLAPFALIFERKVRPKMTISVFFQIVALGFLEPVIDQGFTFLGMQYTSASFASAVMNAVPSVTFVLAVLLRIERIKIKEIRSQAKLLGTLVTFAGAMLMTLYKGPAVNLFHSSNTMHQNAQTHSLDSHKNWITGTLFIFLGCIAWSCFYILQSITVRRYPAELSLSSLICLAGTFESAVVALISDHRPQAWAIGWNYTLYGPLYTVRIVSSGIAYYIQALVMQSRGPVFVTSFNPLCMIIVAALGSFLLGEQLHLGSIIGGIIIAVGLYSVVWGKGKDYTDLTTSSTTIKETETQQLPITSPTEK* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2046 364 PANTHER WAT1-RELATED PROTEIN 12 357 - -
Amo20g2046 364 PANTHER WAT1-RELATED PROTEIN 12 357 IPR030184 GO:0016021|GO:0022857
Amo20g2046 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 335 - -
Amo20g2046 364 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020|GO:0016021
Amo20g2046 364 Pfam EamA-like transporter family 27 159 IPR000620 GO:0016020|GO:0016021
Amo20g2046 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2046 Amo-Chr20 85830939 85835436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2046 10 364 Nodulin-like Gene Family AT4G08300 47.486 3.39e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2046 - - gmx:100777641 556.984