Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2022 ATGGCAGAGCGTGTGTTCCTCACTCATCCTTCGCTCACTTTACCATCTCAACCGTTTCCAACAACTAGAATGGCCTCCACCGCCACAGCCGCCATCGCTGCCTCACGCATTATTCCCTCCGCCACCGCACTCTCCTCTTCAGCTTCCCGCTCCTTCTTCTCCTCCTCTTCCACTTCTCGTTCCTCGCTCAAATGCCTCCACCTTCACTCTTCTTCACGTATCTCTCACCTCTTCGTCAATCAGCGAAGAGCTGAGGTTCGTGTTTCGAGTGGAGACTATGCAACGGTTTCTTCTCCGAAGTCGTTGGCGTCTGATCCTGACCAGCTGAAGAGTGCTCGAGAAGATATCAAGGAGCTTCTCAGGACAAAGTTCTGCCATCCGATTCTGATTCGTTTGGGATGGCATGATGCTGGTACCTACAATAAGAATATTGAGGAATGGCCACAGAGAGGTGGTGCTAATGGTAGTTTAAGATTTGAAGTTGAGCTGAAACATGCAGCCAATGCTGGACTCGTGAATGCATTGAAGCTTATTCAGCCAATCAAAGACAAATATGCTCGTGTGACATATGCAGACTTATTTCAGTTGGCTGGTGCTACTGCTGTTGAGGAAGCTGGAGGCCCAAAAATCCCTATGAAATATGGAAGAGTGGATGTCTCATCACCTGAACAATGTCCTGAAGAAGGCAGACTTCCAGATGCTGGTCCTCCCTCACCGGCTGATCATTTGCGTCAAGTTTTCTACAGAATGGGTTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCGCACACACTGGGAAGGTCCAGACCTGAACGAAGTGGCTGGGGCAAGCCTGAGACTAAATATACAAAAGATGGACCAGGAGCACCTGGAGGACAATCCTGGACAGTACAATGGTTGAAGTTTGATAACTCATACTTCAAGGACATCAAGGAAAAAAAGGATGAAGATTTATTGGTATTGCCAACAGATGCTGTTCTTTTTGAGGATCCATCCTTCAAGGTTTATGCTGAGAAGTATGCTGAGGATCAGGTAGCATTCTTCAACGATTATGCTGAAGCCCATGCCAAGCTAAGCAACCTTGGTGCAAAATTTGATCCTCCAGAGGGCATAGTATTAGATCCTTCTCCAAAGCCACAAGCAGAGAAGTTTGAAGCAGCAAAGTACTCAACTGGAAAGGATTAA 1188 0.4689 MAERVFLTHPSLTLPSQPFPTTRMASTATAAIAASRIIPSATALSSSASRSFFSSSSTSRSSLKCLHLHSSSRISHLFVNQRRAEVRVSSGDYATVSSPKSLASDPDQLKSAREDIKELLRTKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVELKHAANAGLVNALKLIQPIKDKYARVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVSSPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKKDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQVAFFNDYAEAHAKLSNLGAKFDPPEGIVLDPSPKPQAEKFEAAKYSTGKD* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2022 395 Gene3D - 112 365 - -
Amo20g2022 395 Gene3D Peroxidase, domain 2 234 357 - -
Amo20g2022 395 ProSitePatterns Peroxidases proximal heme-ligand signature. 256 266 IPR019793 -
Amo20g2022 395 MobiDBLite consensus disorder prediction 264 291 - -
Amo20g2022 395 Pfam Peroxidase 113 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2022 395 MobiDBLite consensus disorder prediction 219 240 - -
Amo20g2022 395 PRINTS Haem peroxidase superfamily signature 126 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2022 395 PRINTS Haem peroxidase superfamily signature 188 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2022 395 PRINTS Haem peroxidase superfamily signature 206 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2022 395 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2022 395 PRINTS Haem peroxidase superfamily signature 296 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2022 395 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 23 379 IPR044831 GO:0004601|GO:0034599
Amo20g2022 395 SUPERFAMILY Heme-dependent peroxidases 105 365 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo20g2022 395 ProSiteProfiles Plant heme peroxidase family profile. 129 373 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2022 395 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 23 379 - -
Amo20g2022 395 CDD ascorbate_peroxidase 101 367 - -
Amo20g2022 395 MobiDBLite consensus disorder prediction 370 395 - -
Amo20g2022 395 PRINTS Plant ascorbate peroxidase signature 105 125 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo20g2022 395 PRINTS Plant ascorbate peroxidase signature 126 141 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo20g2022 395 PRINTS Plant ascorbate peroxidase signature 187 205 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo20g2022 395 PRINTS Plant ascorbate peroxidase signature 206 218 IPR002207 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2022 Amo-Chr20 82450357 82455402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2022 129 362 Peroxidase AT4G36430 28.947 1.49e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2022 K00434 - gmx:100802238 622.468