Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1993 ATGGAACATAAAAAATCATGTCTCTTGAGTGTGTGCAAAGAATTCAAGCCACACATTCTCATGTTCTTGGCCCAGGTGGGTTGTGCCTTGGTATATTTCATCACTGAAGCTTCCTTCAATCATGGGATGAGTCCTTTTCTATATGTTACTTATCGCTATTTTGTGGCTGCTCTTGTCATGTTCCCCTTTGCATATTTTCTCGAGAGAAAACAACGACCAAAGCTCACATTTGCTTTGTTCATGGAAATTTTTGTGCTTTCCTTGGTTGGGATCAGTGTGCCAATCAACATGTATTTTGCAAGCTTGCAATACACTTCTCCAACCCTAGTTGCTTCCATGTTCAACATCGTAGCTTCCCTTACCTTCATTATTGCTGTAGCACTCAGGTACGAAGCTCTTGATATTGGAGACCCTCACGGAATAGCAAAAGTTATAGGGACATTGATATCCTTAGGAGGTGTAATGACGATGACACTGTACAAAGGACCACCGATGAGGAATTTGTGGGGTCCACTAATCCATATTCAAGGGAAAAATGGTGGCACCGAAGAGAACTGGTTAAAGGGTTCACTTCTTGCAGTTACAAGTTGTGTTTCATTATCTGTCTGGTATATTATGCAGGCATCCACTTTGAAAAGGTACCCAGCTCAACTGTCGCTAACTTCGTGGATGTGCTTTGTTGGAGCAGTGCAATCAGCTGTTTTCACAGCAATTGTACAACATGATCCTTCAGCATGGTTCATCGGCTTCAACATCGATTTGTGGTCCACGTTATATGGAGGAATTGTGGTGTCTGGATTGGTCATATATGTTCAGCTATGGTGCACTGAGAAAAAAGGGCCAGTCTTTGTCACAATGACTACCCCACTTTGTACCGTGCTTGTGGCAATTCTAGCATACTTCGTCTTTGGTGAGAAACTTTATTTGGGCAGCATCATTGGCGCATGTTTTGTCATCGTTGGTCTGTATTTGCTGTTGTGGGGTAAAGAAGGTGACCAACAAGTTCACACTATCACCAACGATACATCAAAGTGCAACGGTGAAGACCCAGTAGAATTATGCAAAATTTGA 1071 0.4239 MEHKKSCLLSVCKEFKPHILMFLAQVGCALVYFITEASFNHGMSPFLYVTYRYFVAALVMFPFAYFLERKQRPKLTFALFMEIFVLSLVGISVPINMYFASLQYTSPTLVASMFNIVASLTFIIAVALRYEALDIGDPHGIAKVIGTLISLGGVMTMTLYKGPPMRNLWGPLIHIQGKNGGTEENWLKGSLLAVTSCVSLSVWYIMQASTLKRYPAQLSLTSWMCFVGAVQSAVFTAIVQHDPSAWFIGFNIDLWSTLYGGIVVSGLVIYVQLWCTEKKGPVFVTMTTPLCTVLVAILAYFVFGEKLYLGSIIGACFVIVGLYLLLWGKEGDQQVHTITNDTSKCNGEDPVELCKI* 357
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1993 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 329 - -
Amo20g1993 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Amo20g1993 356 PANTHER WAT1-RELATED PROTEIN 15 342 - -
Amo20g1993 356 PANTHER WAT1-RELATED PROTEIN 15 342 IPR030184 GO:0016021|GO:0022857
Amo20g1993 356 Pfam EamA-like transporter family 17 155 IPR000620 GO:0016020|GO:0016021
Amo20g1993 356 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo20g1993 Amo-Chr20 78352366 78357129 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1993 1 335 Nodulin-like Gene Family AT5G07050 40.580 9.01e-89 271