Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1910 GGGAGAGTTGCGGCTGCCGTTTCATACGTACGTGACCTCTCAGAGCCACTTCAATGGAGTTTAATTTGGCTGAACCGGTTTGTCATGTCCCAGCTTCCTTCACCGACGACAATACCACGCATTCAAGTGGCAACCATCTCAATTCTTGTGATGTGGAAGGCCATAGAATGTACGGATATTACTGAGTCTGGAAGTGATGACACGGATCTTGTTCATGAGGTTTGGACTTTAGTTTATTATCACAGTTTTCTTGCCAAAGACGAAATACCAAGAGTTGGGATGCGGTTTGAGCATTTGAAGCTGGCCCAGGATTTTTATGCGAGCTATGCAAAGAAAGTCAATTTCATAAGTAAGATATGGAATACAAATTTTGACAGGATGACAAAGGAACCTAACCAATCTATTCATTGTAATCGGGAGGGTTTCCGTGGGTCTCGTGTCAAAGCACCCACACGGAAGAACTTGGTTGCAGCCGTGGGATGCAGAGCAAGGATATATGCAAAGTTTGACAGGGAGAAGCAAGATTGGGTCTTGGTGAAGGTTGATTTGAGGCACTCGCACCCATGTTCAACTGCAGGCATTCGGCCCAACAAGATATTTCTAGCATTGGCTAATGAGGTTAGTGGCCCATTGAACCTGGGCTTTTCAGAGAAGGATGTCAGGAATTACATCTCATCAAGACTCGGGAATGGATCTTCTCAATTGTTAAAAAAATGA 717 0.4449 GRVAAAVSYVRDLSEPLQWSLIWLNRFVMSQLPSPTTIPRIQVATISILVMWKAIECTDITESGSDDTDLVHEVWTLVYYHSFLAKDEIPRVGMRFEHLKLAQDFYASYAKKVNFISKIWNTNFDRMTKEPNQSIHCNREGFRGSRVKAPTRKNLVAAVGCRARIYAKFDREKQDWVLVKVDLRHSHPCSTAGIRPNKIFLALANEVSGPLNLGFSEKDVRNYISSRLGNGSSQLLKK* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1910 238 Pfam FAR1 DNA-binding domain 104 190 IPR004330 -
Amo20g1910 238 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 87 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1910 Amo-Chr20 69250098 69261701 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g1910 FAR1 5.5e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1910 - - ahf:112757560 266.159