Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1904 ATGGAACAACTGGTTCAAAACCTTGCTAAACTGGGCGAGAGAGAGGGAGATATGTCCCTAAGAGCCACTGAAGATGACTCAAAGAACAGTGAAAAAGCTGCTGGGTTGAAAGGGAAAACAGTTATGGAAACAAGTAACCCTAATTTTATCACCACCCATTCACACTCCATTCACACTCATCCCTCGAACGTTTCCAGCAGCCCTCATCCCTCGAACTCTTCTCCTCCGGTAGAAGGTGCTGTCGCCGCCGGCGGGGACAGACCGTGGGTGCCTTCGTCATCTGGGGAAGCTCTACTCGGCCCTCTTCACATCGTTCCTCCTCTCCTCGCCGTTGCACGAAGTTCTGAGTTGAGCTCGTGGCATCGCCGTCGCGAAGGGTTCCTCCCCTCCTCGCCGTCCATTGTTTCTGATTCTCTGCTCCTCGCCGCTGAGTACTTCTGTGACAGATTCAATCTCAAGCTACACACTGTTAGGATCATTGCTTCCAGTTTTGGATTGGCGAATCTTTTCTCCAGGCCCGGTGGAGGGTTCATATCTGATGCAGTTTCAAAGAGGTTTGGAATGAGGGTGCACTATGTTGGGACTTTGGAAGATGGAACCAAGTTTGATTCCAGTAGGGATAAAGATCAACCTATAAAGTTCACTCTTGGTCAAGGTACTACTATTTCAGCACATGAATGA 681 0.4963 MEQLVQNLAKLGEREGDMSLRATEDDSKNSEKAAGLKGKTVMETSNPNFITTHSHSIHTHPSNVSSSPHPSNSSPPVEGAVAAGGDRPWVPSSSGEALLGPLHIVPPLLAVARSSELSSWHRRREGFLPSSPSIVSDSLLLAAEYFCDRFNLKLHTVRIIASSFGLANLFSRPGGGFISDAVSKRFGMRVHYVGTLEDGTKFDSSRDKDQPIKFTLGQGTTISAHE* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1904 226 SUPERFAMILY FKBP-like 182 223 - -
Amo20g1904 226 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 142 190 IPR044772 GO:0015112
Amo20g1904 226 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 189 224 IPR001179 GO:0003755
Amo20g1904 226 Gene3D - 172 226 IPR046357 GO:0003755
Amo20g1904 226 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 142 190 - -
Amo20g1904 226 MobiDBLite consensus disorder prediction 1 86 - -
Amo20g1904 226 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 185 226 IPR001179 GO:0003755
Amo20g1904 226 MobiDBLite consensus disorder prediction 14 33 - -
Amo20g1904 226 MobiDBLite consensus disorder prediction 41 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1904 Amo-Chr20 68537277 68545523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1904 141 189 Inorganic Solute Cotransporters AT1G12940 69.388 2.24e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1904 K02575 - aip:107624134 167.162