Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1881 ATGGGCACGCCTCGTAAAGCGTCTCTTGCAGTGTTCTTACTTCTCTTTGTTGCTCTCTGCCATGGGGCAACTTCGGCGAACAAGAAGACCACCTACATAGTCCACGTGGCGAAATCTCAGATGCCGGAGAGCTTCGAGCACCACGCCGAGTGGTACGCTTCCTCTCTCAAATCCGTTTCCGAATCGGCGGAAATGCTTTACACCTACGAGAACGCCATCCATGGGTACTCCACCAGGTTAACGGAGGAGGAAGCTCGTTTGTTAGAGGCACAGGACGGTGTCCTCGCCGTGCTTCCGGAGACAAAGTACGAACTCCACACCACGAGGACTCCGTTGTTCCTGGGCCTTGACAAGAGCTCGGATCTTTTTCCGGCGTCGGATTCCTCCAGTGACGTCATCGTCGGAGTTCTCGACACCGGTGTTTGGCCAGAGAGCAAGAGCTTTGACGACACTGGGCTCGGACCCGTTCCCAGCACGTGGAAAGGCACGTGCGAAACTGGAACCAACTTCACTGCTTCTAACTGCAACAGAAAACTCATAGGAGCGAGATTCTTCGCCAAAGGCTACGAAGCCATGCTAGGTCCAATCGATGTGACTAAAGAGTCTAAGTCCCCTCGCGACGATGACGGCCACGGGACCCACACCGCCAGCACCGCCGCGGGATCTGTTGTAACTGGCGCCAGCCTCTTTGGCTACGCACAGGGGACGGCGCGTGGGATGGCCACGCGCGCTAGAATCGCGGCATACAAAGTATGCTGGATCGGAGGGTGTTTCAGCTCTGATATTCTCGCCGCCATTGATAGGGGCATTCAGGATAACGTTAACGTTCTTTCTATGTCCCTTGGTGGTGGAAGCTCTGATTATTACAGAGACAGTGTTGCAATTGGATCCTTCGCTGCAATGGAGAAAGGGATTCTAATTTCTTGTTCTGCTGGAAACGCTGGTCCCAGTCCTTCGAGTCTCTCCAATGTGGCACCATGGATCACTACCGTGGGCGCGGGTACACTTGATCGTGATTTTCCGGCGTACGTTAGCCTCGGTAACGGGCTCAACTTCTCTGGTGTTTCCTTGTATCGAGGTAACGCTTTACCTGATTCTCCATTACCGTTTGTTTACGCTGGCAATGCAAGCAACGCGACGAATGGAAACTTGTGCATGGTGGGAACACTATCGCCGGAGAAAGTTGCCGGGAAAATCGTGTTGTGTGAAAGAGGAGTTAGCGCCAGGGTTCAGAAAGGTGCTGTGGTGAAGGCTGCTGGAGGATTGGGAATGGTGCTGGCTAACACCGCTGCCAACGGCGAAGAGCTTGTGGCTGACGCGCACCTACTTCCGGCGACGGCGGTAGGTGAGAAAGCCGGAGACGCCGTCAAGAAGTATCTTTTTACTGACGCTAAGCCAACCGTGAAGATCGATTTTGAAGGGACTAAGGTAGGGATCCAGCCGTCGCCGGTGGTGGCGGCGTTCAGTTCCCGTGGCCCCAATGGTTTAACGCAACAGATCTTGAAGCCTGATCTGATCGCACCGGGTGTCAACATCTTAGCGGGTTGGTCCAGGGCGGTGGGTCCCACAGGCTTAGCCGTTGATAACAGGCGCGTGGACTTCAACATCATCTCCGGCACTTCAATGTCGTGCCCTCACGTGAGTGGCTTAGCTGCGCTGGTCAAATCGGCTCATCCTGAATGGAGCCCAGCTGCGGTTCGGTCGGCTCTCATGACAACGGCATACACGGCTTACAAGAACGGCCAAAAATTACAAGACAGCGCCACCGGAAAGCCATCTACTCCGTTCGATCACGGATCTGGACACGTGGACCCCGTGGCGGCCCTTAATCCTGGACTCGTCTATGATCTAACCCCTGAAGACTACCTAGGCTTCTTATGTGCTTTGAACTACACCGAAGGTGAGATCCAAAGCGTTGCGAGAAGAAATTTCAAGTGCGACGCGGGAAAGGCTTACAGTGTGACCGATCTCAATTATCCTTCGTTTGGTGTGGTGTTTGAATCATCAACGGGTGCGGTGAAGCACACGAGGACCCTCACTAACGTGGGACCCGCAGCAACGTTCAAGGCTTCCGTGACGTCAGATTCCCCATTGGTGAAGGTATCGATTGTGCCGCAGGTGTTGAGCTTCAAAGAGGGGGAGAAAAAGTCGTATACAGTAACGTTCACTTCATCTGGTGCGTCCCCACATGGTAATGCCTTTGGACGGTTAGAATGGACGGATGGGAAAACTGTGGTTGGAAGCCCAATCTCAATTAGTTGGTTTTAA 2268 0.5379 MGTPRKASLAVFLLLFVALCHGATSANKKTTYIVHVAKSQMPESFEHHAEWYASSLKSVSESAEMLYTYENAIHGYSTRLTEEEARLLEAQDGVLAVLPETKYELHTTRTPLFLGLDKSSDLFPASDSSSDVIVGVLDTGVWPESKSFDDTGLGPVPSTWKGTCETGTNFTASNCNRKLIGARFFAKGYEAMLGPIDVTKESKSPRDDDGHGTHTASTAAGSVVTGASLFGYAQGTARGMATRARIAAYKVCWIGGCFSSDILAAIDRGIQDNVNVLSMSLGGGSSDYYRDSVAIGSFAAMEKGILISCSAGNAGPSPSSLSNVAPWITTVGAGTLDRDFPAYVSLGNGLNFSGVSLYRGNALPDSPLPFVYAGNASNATNGNLCMVGTLSPEKVAGKIVLCERGVSARVQKGAVVKAAGGLGMVLANTAANGEELVADAHLLPATAVGEKAGDAVKKYLFTDAKPTVKIDFEGTKVGIQPSPVVAAFSSRGPNGLTQQILKPDLIAPGVNILAGWSRAVGPTGLAVDNRRVDFNIISGTSMSCPHVSGLAALVKSAHPEWSPAAVRSALMTTAYTAYKNGQKLQDSATGKPSTPFDHGSGHVDPVAALNPGLVYDLTPEDYLGFLCALNYTEGEIQSVARRNFKCDAGKAYSVTDLNYPSFGVVFESSTGAVKHTRTLTNVGPAATFKASVTSDSPLVKVSIVPQVLSFKEGEKKSYTVTFTSSGASPHGNAFGRLEWTDGKTVVGSPISISWF* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1881 755 CDD PA_subtilisin_like 343 470 - -
Amo20g1881 755 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Amo20g1881 755 Pfam PA domain 383 455 IPR003137 -
Amo20g1881 755 Pfam Fibronectin type-III domain 656 752 IPR041469 -
Amo20g1881 755 Pfam Subtilase family 129 582 IPR000209 GO:0006508|GO:0008236
Amo20g1881 755 Gene3D - 337 478 - -
Amo20g1881 755 SUPERFAMILY Subtilisin-like 105 613 IPR036852 GO:0004252|GO:0006508
Amo20g1881 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 106 IPR037045 -
Amo20g1881 755 CDD Peptidases_S8_3 103 575 IPR034197 -
Amo20g1881 755 Gene3D - 626 754 - -
Amo20g1881 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 753 IPR045051 -
Amo20g1881 755 Gene3D Peptidase S8/S53 domain 131 622 IPR036852 GO:0004252|GO:0006508
Amo20g1881 755 Pfam Peptidase inhibitor I9 31 106 IPR010259 -
Amo20g1881 755 ProSiteProfiles Serine proteases, subtilase domain profile. 102 609 - -
Amo20g1881 755 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Amo20g1881 755 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Amo20g1881 755 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Amo20g1881 755 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 21 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1881 Amo-Chr20 67114812 67117964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1881 1 754 Subtilisin-like Serine Gene Family AT5G67360 73.184 0.0 1149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1881 - - gmx:100815413 1241.48