Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1877 ATGCAGATAGAAGCCAGAAGATTGGAAATTACTGATCAATGGTTCTTTAAGCTCTTCCTTCTCATCACTGATATTGGATTCGAAGGCAAAGTCAGTGGAAAGGATACAAAGACTAATGAGACTAAGGCTGCTGTGCTGGCTATGGATGAATCAATATTAGATGTAGATCAGGTGGAAAATCTCATTAAGTTTTGTCCTACCAAAGAAGAGATGGAACTTTTGAAGGGATACACTGGTGACAAAGAGAATTTGGGAAAATGCGAACAGCTGATGAAGGTGCCACGAGTAGAGTCAAAGTTAAGAGTATTCTCTTTCAAGATTCAATTTCTGTCTCAGGTTACAGAATTTAAGAAGAGTTTAAAAACTGTGAACTCTGCTTGTGAAGAGGTCCGAAAGTCTGTCAAGCTTAAGATCATGAAGAAAATTCTTTTTTTTGGGTCGCCTGGACTGCTTGACTTCCACTTAGACCTTGTAAGCCTGGAAGCTGCGACTAAGGATAATATTGAGGATGATGATAATGAAGATTAA 528 0.3864 MQIEARRLEITDQWFFKLFLLITDIGFEGKVSGKDTKTNETKAAVLAMDESILDVDQVENLIKFCPTKEEMELLKGYTGDKENLGKCEQLMKVPRVESKLRVFSFKIQFLSQVTEFKKSLKTVNSACEEVRKSVKLKIMKKILFFGSPGLLDFHLDLVSLEAATKDNIEDDDNED* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1877 175 Pfam Formin Homology 2 Domain 38 146 IPR015425 -
Amo20g1877 175 SUPERFAMILY Formin homology 2 domain (FH2 domain) 38 170 - -
Amo20g1877 175 PANTHER FORMIN-J 41 168 - -
Amo20g1877 175 Gene3D Formin, FH2 domain 30 147 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1877 Amo-Chr20 66322875 66326029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1877 43 147 FH2 protein (formin) Gene Family AT5G07740 80.000 2.21e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1877 - - aip:107643586 201.445