Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1867 ATGGCTACACCACATGATGAAAATAATGGAACAGTTTCAATTTCAAGGGTTGTGTGTGTGCATCCAAAGATTGAACAACCTCATAGGGTGTTAAGCCTCTCAAATTTGGATAGGCAGTGTCCAAGACTTATGCAATTGGTGTTCTTCTACAACAACTTGATGAAGAACGATCTGTCCCTCAATTCAGTGTTCAACAGCTTGAAAATTGGGTTGGAAGAGACCTTGATTATGTGGTACCCGGGTGCTGGAAGGTTGATGATGATGATGAACCCTAATAATAATAATAATAATAATAATAATAATCAAAGTGATGGAAAGCTCAATCTTTGGTGCAATAATGAAGGTGCAATTCTTGTGGAGGCTGAGACCAAAGCTAGAATCTCACAACTTGGGGATCTTTCTCAGTACAATGAGTTCTTCGAGAATCTTGTTTATAAGCCTGATTTTGATCCCAATTTCTCAAACATGCCTTTGATTGTTGCTCAGGTAACAAAATTTGGTTGTGGAGGGTATTCAATTGGCATTGGAACAAGCCACTCACTATTTGATGGACCAGCAACCTATGATTTCTTGTATGCATGGGCTTCAAATTCTGAAATTATGAAGGCTATTACAGCTAAGCCTCTTGAGCTTCCAAAACCAGTGCATGAGAGGGGAATACTTCTAAGTAGTGGTAATAATAATAAGCAACAACTTTCAAAAGGGTCTCTGAATTTACCTTCAAGTTCGAATTTTTATGCTCATGATGAGCATAATAATCAACCAATTAGGGCTATGGCAGTACAACATTTATATCAACTCATAATGCAAGCAACTGCAGCAGCTACACTACTTCAAAGTAGAAGTGATGAACCCTCCGAAAATAATTATCAAGAGAAGTGGGTTCTTAAGACCTATCATCTATCTGCTGCAATGATAGATAACTTGAAAAGGAAGTACTTATCTTCCATCAAGACAGGATCTCTTCCATTCTCAACCTTTGAGGTTCTTACAGCTCATCTCTGGAAGGCAAGGACAAAAGCTTTAGGGCTGAGCAAAGAGAAGGTAGTATGCCTTCAATTTGCAGTGGACACAAGGAACAAGATGGTGCCTCCATTACCAAAAGGCTTCAGTGGTAATGCTTATGTTCTTGCCTCACTTATGATGTCTGTGTCACAATTATTGGACCATTCTTCCCATGAATTGATCATTGAGAAAATAAGAGAAGCCAAAAATGCTGTGAACCATAGCTATGTCAAATCATACATTGATGCATTGGAGTTAGGCTCTAATAATTCTCTGCCTCCACTTAAGGAACTAACTCTTGTTAGTGATTGGACGAGAATGCCCTTCCATAACATTGAGTTCTTTCATGGAAGAAAAGCAGCTTATGCTTCTCCACTTGCCACTCCTGTTCCTCAGGTTGCTTATTTCATGCAGAGTCCATTTGATGTTGGTGGTGTTGACCTCAGGATTGGCTTTCAAGATGGAATAACCCTAAGTGCTTTTACTCAATGCTTCTTAATCTAA 1509 0.3903 MATPHDENNGTVSISRVVCVHPKIEQPHRVLSLSNLDRQCPRLMQLVFFYNNLMKNDLSLNSVFNSLKIGLEETLIMWYPGAGRLMMMMNPNNNNNNNNNNQSDGKLNLWCNNEGAILVEAETKARISQLGDLSQYNEFFENLVYKPDFDPNFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYDFLYAWASNSEIMKAITAKPLELPKPVHERGILLSSGNNNKQQLSKGSLNLPSSSNFYAHDEHNNQPIRAMAVQHLYQLIMQATAAATLLQSRSDEPSENNYQEKWVLKTYHLSAAMIDNLKRKYLSSIKTGSLPFSTFEVLTAHLWKARTKALGLSKEKVVCLQFAVDTRNKMVPPLPKGFSGNAYVLASLMMSVSQLLDHSSHELIIEKIREAKNAVNHSYVKSYIDALELGSNNSLPPLKELTLVSDWTRMPFHNIEFFHGRKAAYASPLATPVPQVAYFMQSPFDVGGVDLRIGFQDGITLSAFTQCFLI* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1867 502 Gene3D - 8 232 IPR023213 -
Amo20g1867 502 Gene3D - 271 498 IPR023213 -
Amo20g1867 502 Pfam Transferase family 13 489 - -
Amo20g1867 502 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 501 - -
Amo20g1867 502 PANTHER BRASSINOSTEROID-RELATED ACYLTRANSFERASE 1 9 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1867 Amo-Chr20 65218925 65222639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1867 12 488 Monolignol Biosynthesis Gene Families AT5G48930 24.587 2.90e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1867 K15400 - gmx:100779295 640.188