Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1823 ATGAGAGATGCACGGAAGACAGAGGAGCAGAAACGCGACAAGGGGGAGAAGGGCGAGTCACTAAGAAAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGTGGGTGGCCAGTTCTTCATTAGATGTGGTCTGCATCATCTTGTGCAAAGTCCAGAATGCAACCTGTACCAACTTATGAAAGACAGGGAGAAGATGTTTTCTGAGGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTATATGCACCAGTGGGGATACTTCCACCTTGTTATTGTGCAGCAAATGGAGATTTATACTATGGTCTATTCTGATTTTGGCCTAGCACGTGAGATCAGTTCACAACCACCCTACACTGAGTATTTTATAAGTTGTACGCTGGCTTCTGTTAGGTATCGTGCTCCTGAAGTGCTACTTCAATCTTATCTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTGTTCTCTCTTCCTCCTCTTTTCCCTGGTGCCAGGTCATCAAAGGCACCTGATGTATCAAAACTAGTTTTCGGAAGCAAATTGCCTATTCTAAGTGATGAAAAACTATCATTGAAGAGCGGGCCTTTACGAATAGAGGACGCCGGAATCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTCAATTCAGTCGCAGATGTTAGATGATTAG 759 0.4269 MRDARKTEEQKRDKGEKGESLRKMNHPNIVKLKEVIRESDILYFVFEYMVGGQFFIRCGLHHLVQSPECNLYQLMKDREKMFSEGEVRNWCFQVFQGLAYMHQWGYFHLVIVQQMEIYTMVYSDFGLAREISSQPPYTEYFISCTLASVRYRAPEVLLQSYLYSSKVDMWAMGAIMAELFSLPPLFPGARSSKAPDVSKLVFGSKLPILSDEKLSLKSGPLRIEDAGISCAQWEKPRICFNICSIQSQMLDD* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1823 252 Gene3D Transferase(Phosphotransferase) domain 1 68 217 - -
Amo20g1823 252 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 198 - -
Amo20g1823 252 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 19 198 - -
Amo20g1823 252 MobiDBLite consensus disorder prediction 1 20 - -
Amo20g1823 252 Pfam Protein kinase domain 18 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g1823 252 Gene3D Phosphorylase Kinase; domain 1 18 49 - -
Amo20g1823 252 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g1823 252 SUPERFAMILY Protein kinase-like (PK-like) 20 191 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1823 Amo-Chr20 60617607 60621280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1823 21 188 Core Cell Cycle Gene Families AT3G48750 33.143 1.49e-20 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Amo20g1823 Pkinase 1.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1823 K08829 - gmx:100810150 234.958