Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1801 ATGTTCTTGTCACTATATGGCCACTGGAGTGAACAAGATGCTGCAATTTTAGTACCAGGAGACATAATCAACATTAAATTAGGAGATATCATTCCGGCCGATGCTTGTCTTTTCGAGGGCGATCCTCTAAGTGTTGATCAGTCTGCTTTAATAGGAGAATCTCTTCTAGTGACCAAGAACCCCACTGATGAAGTGTTTTCTAAATCAACAGTCAAGAAGGGTGAGATAGAAGCAGTTGTGATTGCCACTGGTGTGCACACATTCTTTGGTAAAGCGGCTCATTTGGTGGACAGCGCTAACCAAGTTGGACACTTCTAG 318 0.4308 MFLSLYGHWSEQDAAILVPGDIINIKLGDIIPADACLFEGDPLSVDQSALIGESLLVTKNPTDEVFSKSTVKKGEIEAVVIATGVHTFFGKAAHLVDSANQVGHF* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1801 105 Pfam E1-E2 ATPase 7 101 - -
Amo20g1801 105 Gene3D - 84 98 - -
Amo20g1801 105 Gene3D - 7 83 - -
Amo20g1801 105 PANTHER PLASMA MEMBRANE ATPASE 7 105 - -
Amo20g1801 105 SUPERFAMILY Calcium ATPase, transduction domain A 7 96 IPR008250 -
Amo20g1801 105 PANTHER CALCIUM-TRANSPORTING ATPASE 7 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1801 Amo-Chr20 58818527 58821028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1801 7 105 Primary Pumps ATPases AT2G18960 83.838 2.22e-50 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1801 K01535 - gmx:100791692 172.94