Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1781 ATGTTAATAGAAGTGGAAACTCTGCTGCTTCAAAGCCCTGAATATCTGGTATGCATTGTCATTATGATGAGAAATGGCGAAGTTCAATTACATGCGCGGAAACTTCGATCCCTGGTTGATCTCTGTGTTCAGAAAATAATAGATAATATAAGATACCTTGGAAATGTTGGTTGTGTCGATCTACACCTGCTCGAGCGAATTTCGCCACACTACACGGGAGCTGATTTGAGTCCAATGACTGATAAGTTATGGAAAGGATTCTTTGAAAAGCAGTACAGGTCAAAAATTGCACCAAGGAAAGATGGAGTTAGTGAGGGACAGTTCAGTCAAGTTTTGCTTCATGAGATGGATGCAATAAGACAGGCTTGTGCCTCCTTGCAGGCGGGTTATCAGCCCAAGAAACAAAGATGGTGGAAGTGTCGAATCAAGTTTGTATCAAGATCTCAAGTATTGGGGAGCAGATACGACTCCTCTGAAAAAGAGTGGGCTCAACCCAGGAATTACTTAGCATTCGTGTCGAAATGTATGAGATGCTTGAATTGTGACCATGGAGATAGACTTACCATAAAGAATCTTGTCCCACGATCTTACTTCCACCTTTTTCTCAGCCATGACCTTGCCTTGACCATGAAAAATCTTGACTCTCAAGTTTTAACACCCACATCTTCCTTGGTCATCAAGTTCTATGTTTTCTTTAGCTTGCTCCTCAAATTTTCCACCCATGTTCTCCACTCAGCTTAA 741 0.417 MLIEVETLLLQSPEYLVCIVIMMRNGEVQLHARKLRSLVDLCVQKIIDNIRYLGNVGCVDLHLLERISPHYTGADLSPMTDKLWKGFFEKQYRSKIAPRKDGVSEGQFSQVLLHEMDAIRQACASLQAGYQPKKQRWWKCRIKFVSRSQVLGSRYDSSEKEWAQPRNYLAFVSKCMRCLNCDHGDRLTIKNLVPRSYFHLFLSHDLALTMKNLDSQVLTPTSSLVIKFYVFFSLLLKFSTHVLHSA* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1781 246 Pfam Piwi domain 92 133 IPR003165 GO:0003676
Amo20g1781 246 Gene3D - 44 136 IPR036397 GO:0003676
Amo20g1781 246 ProSiteProfiles Piwi domain profile. 94 155 IPR003165 GO:0003676
Amo20g1781 246 PANTHER OS08G0169600 PROTEIN 31 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1781 Amo-Chr20 54859111 54863527 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1781 100 132 Eukaryotic Initiation Factors Gene Family AT1G48410 81.818 1.25e-11 62.4