Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1586 TCAATTTGCAAGACTGCGAAGAATATTGCGAAGCCCATAATTGCTGAGCAGATTCTGAAATATAAAATTGATTCTGTTGAGTTTGAAACTCTGACATTGGGATGCCTATCCCCAACTTTTCAAGTTTTGTATCTCACTGCTACTTCTGTCTTGTCTTGGTCATTTGTTCCTCGCTTTCTTAAACTAATGATGCAGCTCTCATCTCAGATAAGGTGTAGTGGTAATCTTGGCCTTGGTCTTGAGTTGGATTCATTTATGGCTGGTGTTATAGTTTCTACAACATATTTTGCTCAACATACTTTGGATTAG 309 0.3786 SICKTAKNIAKPIIAEQILKYKIDSVEFETLTLGCLSPTFQVLYLTATSVLSWSFVPRFLKLMMQLSSQIRCSGNLGLGLELDSFMAGVIVSTTYFAQHTLD* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1586 102 PANTHER PUTATIVE-RELATED 2 62 - -
Amo20g1586 102 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 2 62 IPR045050 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1586 Amo-Chr20 43780644 43781400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1586 43 102 Antiporters AT5G51710 56.579 7.25e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1586 - - aprc:113868186 89.3521