Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1582 ATGGCGATCGATAAAACACTAGGTTCTTTACCGTCGTTTCCACCGCCATTGCTGCTCAGTTTTCGCCATCGTTGTCGTTGTAGTTTCTGTAGTCGAAAGCTTCTGAATCGAGCCATTGTTTTAGATCTACTTCTCCTTCGACTTGCCACTGCGTCTTTGAAGAAAGATGTGGATGGACAGATTCCTAACTATCCCAATCTTCCATCCAAGTTGTTGTGTCTCCTTCACAATGTTACTTTGCATGCTGACCCAGAAACTGATGAAGTTTATGCTCAGATGACACTTTAA 288 0.4306 MAIDKTLGSLPSFPPPLLLSFRHRCRCSFCSRKLLNRAIVLDLLLLRLATASLKKDVDGQIPNYPNLPSKLLCLLHNVTLHADPETDEVYAQMTL* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1582 95 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 50 95 IPR044835 GO:0003677|GO:0006355|GO:0009725
Amo20g1582 95 PANTHER AUXIN RESPONSE FACTOR 50 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1582 Amo-Chr20 43138462 43140103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1582 51 95 B3 DNA Binding Superfamily AT1G19220 80.000 5.66e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1582 - - pper:18788345 95.5153