Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1569 GAGAGAGAGCGCTGCAGCCACTGGAGAGGAGCCCTCCAGCCCTCGTCACTATCAGCTCCATCGCCGTCGTCACCATTGGATCTGCGTGAAACCGTCGTCCTCGTCGTCACGATCGATGCTTCTCCTCATCGTTTATGGGTTGTCACCTCTCCTGCTTCTGCTGTCACGCCATCGTCTGCCCTTCTGGACTTTGCTGCTTTTGAATCACACCCTGTCACTGAAAAATTTGGTTGTTGTGATAGAGAAGTTTGGTTGTTGCTTTGGCTTTGGATAAGGGAAGCATTGGAAGCTGGGAAGAGTTACTATGGAAGGTTGCTGAATTATAAGAAGGATGGAATGCCCTTCTGGAACCTACTTACAATTTCACCCATCAAGGACGAAGACGGCAAAGTCTTCAAATTCATCGGAAGTGAGGTAGAAGTAAGCAGGGCTATGAGACTTGAAGATAGAGTGGAGGAGGCTATGAATAAGGCTGGCTTTTGGCAAGATCAACAGGCACCAAACACGGGTGGTGGGAACAATAGCAGCCAAGTGTATGAAAGGAGAAAGAAAAAGCATGACAAATGA 567 0.4832 ERERCSHWRGALQPSSLSAPSPSSPLDLRETVVLVVTIDASPHRLWVVTSPASAVTPSSALLDFAAFESHPVTEKFGCCDREVWLLLWLWIREALEAGKSYYGRLLNYKKDGMPFWNLLTISPIKDEDGKVFKFIGSEVEVSRAMRLEDRVEEAMNKAGFWQDQQAPNTGGGNNSSQVYERRKKKHDK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1569 188 MobiDBLite consensus disorder prediction 1 24 - -
Amo20g1569 188 Coils Coil 144 164 - -
Amo20g1569 188 MobiDBLite consensus disorder prediction 159 188 - -
Amo20g1569 188 ProSiteProfiles PAC domain profile. 99 153 IPR000700 -
Amo20g1569 188 SUPERFAMILY PYP-like sensor domain (PAS domain) 80 141 IPR035965 -
Amo20g1569 188 Pfam PAS domain 91 138 IPR000014 -
Amo20g1569 188 Gene3D PAS domain 83 184 - -
Amo20g1569 188 PANTHER FLIPPASE KINASE 1-RELATED 91 143 - -
Amo20g1569 188 PANTHER PHOTOTROPIN-1 91 143 - -
Amo20g1569 188 MobiDBLite consensus disorder prediction 161 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1569 Amo-Chr20 41197175 41198410 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1569 91 160 AGC Kinase Gene Family AT3G45780 61.429 1.54e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1569 K20715 - ahf:114925890 96.2857