Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1565 ATGCTCCGAAGGGGCTACAGAAAGCAGGTGAAGGAGGTTTGCAATCTGTACATCCAGGAAATGGAGCTGCTTCAGATCAAGAAGCAGCGCAAGGACAAAGCTTGCAGAGAAGCCCTTAGAGTTGCCAATGAGGAGCGCAAGAAGCTCAAGGCCGAAGCTGCGCAGATCAGGGCTCAGGAGCACAAGATCGCACAACAAGAATTCAGAGAAACACTCATGACTACTGACCATGAACCTAATACTGAGCGGGGCAGCATTGAGAACAGAGGTGGCTTTGTCTCAAACATGCCAGGTACTACAAATAGATTAGACATTCTTGATCCCGCTTTGTTGAGGAAGGGTCATTTTGACAAGATCATTCGAGTTGGTTTGCCATCAAAGGATGGAAGATTTGCTCCCAACCTGATGGGCCAAGGCAGATGTATTTCACATACTTTCCAGAACATGGAAGACACCTGCAGAAAGATGCTTCATGGACTATTCATGGATTGTGGTGGTGTTGGAGGCAATCTAAGCTCTGGAAGAGATTGTTTTTGTCTTATGCCTACTGGAGAAGGCAAGTCGATGTGTTATCAGATTCCTGCACTGGCCAAAATAGGAAATGTGCTTGTTGTTTCTCCTTTAATAGGCACAATTGTGATTTTTGGCTTTTGTTCTGTTGACAGCCTTAATGGAAAACCAAGTAATGACATTAAAAGAGAAAGGGGGCCCGTCGGAAGAGGAAAGGGGAGATCTGAGAGTGAGGGTTTCACCACCAGTGGAAGGAGGGAAGCTCACTGCGCCGCGCCACCACAGCAGTCCATGCTGCCAGGGTCACCGTCGCCAACCTACCTCACCGTCGCACCACCACGTTGCCACCGATCTGCCGCCGCCATGGCCGTCACGAAGGAGGGAACCCAGAACAGAGAGGCGCACGAAGAAGAGAAACTTGCGGCTAGCCTTCTCGCCGCCACTGCTTCCGTGTCTTCCAACGGCGCTACTATCGCCGCCGTGAATCGCGGCCAGAGGGGGAGCGAGAGCCAGGAGAGAGGCGTGTCACACTCTGCTGCGGTCGAGCCAGCCTTGCTGCCTCCGCTACTGGGGGTTGTTTCCGTCACGGTTGTCGGCAAGAGGGAGAGAGCAGTGCGGGAGGAACAGAACGCGATGGAGGAGAAGCCGGCTCCGTCACTACCGATCTGA 1179 0.5242 MLRRGYRKQVKEVCNLYIQEMELLQIKKQRKDKACREALRVANEERKKLKAEAAQIRAQEHKIAQQEFRETLMTTDHEPNTERGSIENRGGFVSNMPGTTNRLDILDPALLRKGHFDKIIRVGLPSKDGRFAPNLMGQGRCISHTFQNMEDTCRKMLHGLFMDCGGVGGNLSSGRDCFCLMPTGEGKSMCYQIPALAKIGNVLVVSPLIGTIVIFGFCSVDSLNGKPSNDIKRERGPVGRGKGRSESEGFTTSGRREAHCAAPPQQSMLPGSPSPTYLTVAPPRCHRSAAAMAVTKEGTQNREAHEEEKLAASLLAATASVSSNGATIAAVNRGQRGSESQERGVSHSAAVEPALLPPLLGVVSVTVVGKRERAVREEQNAMEEKPAPSLPI* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1565 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 209 IPR027417 -
Amo20g1565 392 MobiDBLite consensus disorder prediction 226 281 - -
Amo20g1565 392 MobiDBLite consensus disorder prediction 227 242 - -
Amo20g1565 392 PANTHER EXPRESSED PROTEIN 1 78 - -
Amo20g1565 392 Gene3D - 98 124 IPR027417 -
Amo20g1565 392 Coils Coil 39 62 - -
Amo20g1565 392 PANTHER EXPRESSED PROTEIN 1 78 - -
Amo20g1565 392 Gene3D - 167 213 IPR027417 -
Amo20g1565 392 MobiDBLite consensus disorder prediction 74 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1565 Amo-Chr20 40447033 40450929 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1565 71 104 PP2C-type Phosphatase Gene Family AT1G22280 67.647 9.37e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1565 - - adu:110275471 125.946