Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1507 ATGATGACACCACTTTCCTCCTCCGAAATCCTTCGTCTCTCCGCCGCGGTGATATTCACGCTCTCTCTACTGATCCCCACTTCCCATGCTCTCGGCTCCGGCGCTACCCTTGCCGTCACCGACGCCTCCGACACCGTCTGCGGCGTCGTCGCGGGGGAATCCACCCAACGCATTGAGTGCTCCCGCCTCGGTAGTCAGCTTGTCCCCGCCGTTCCCCCTAACATCTCATTCTCCACCGTCTCCGGCGGCGCCACCTTCTTCTGCGGCCTCAGGTCCGGCAACCGCACCTTGCTCTGTTGGAACACCATCACCACCACCAACGGAACCTTCACACCAAAGAGACTCTACAACAACGACACTGTTCTATTGGAGAATCTCGCCGTCGGAGAAACCCACGTTTGCGCCACCGTGGTCGGCGCCGGAACCGTTACGTGCTGGAGAACCAGCAAAACGTTCAAGTCCCCATCTAGGTCTCTTCAATTCTCTTCAATCTCATCTGGGTCAGGATTCTCTTGCGGGATTCTGAAGAACAGTTCTCAAGTTCGATGTTGGGGTGAAACGGTAATTTCAAGAGTGATTGAAAATGGGTTTAAGAACATGTCTATGTGGAGCATTGTCGCTGGTGGTTCACACGTTTGTGGGTTGAATTCAACTGGATTTCTGGTTTGCATAGGGGACAACGACAATTTTGGGCAACTTGATGTTCCAAAAAATGAAGCTTGGGAATTTGGTGAATTAGCACTTGGTGCTAGCCATGGATGTGCTTTGAGAAGGTTGAATGGAACTGGAAGCGTTGTTTGTTGGGGTGGTGATGGTAATTTCACATCGGAAGTAACAAAAGGTGTTTCCTTCGAGGTAATTGTTTCTGGGTCTAACTTCACTTGTGGATTAGTGACACGTAATCTTAGTGTTCTTTGTTGGGGTCCTGGTTGGCCTAATAATAATGGTTCAAGATTTGAACTTCCATTGCCTAGTGTTCTTCCGGGTCCTTGTGTTCAATCCTCTTGTGATAGTTGTGGTCCATATCCTGATTCTCAATCTCTGTGTTCCGATTCTGATAGCAACATTTGCAAGCCTTGTTGGCCTCCAATTCAAGCTCCAGCAGCGGCAATGGTTCCATCTTCGCTGCCACCGGGGCCTGCTCCTCGGCAGAGGTCGCGGTCGAGGACATTGACTAGGGGTTTATTGGCATTTGCTATTGTTGGATCAGTTGGTGCTGTTGCTGGAATTTGCACAATTGTTTATTGTTTGTGGAATGGTGTTTGTTTTGGGAAGAAGAAAGTGCACAATTCTGTGCAGCCAACAATCACAAGAGGTAGTAGTACTTCAAGTGGTGTTTCCAACAATAGTAGGAACAATAGCAGGCCTCTTTCGAGGACTTCCACAATTATGCGACAAGGTTCGAGGATAATGCGGCGCCAGAGGAGTGGCACCTCATCCACAAAACACCCTGATAGGGCTGAGGAATTCGCCTTGGCCGAGCTAATAGCTGCAACGGACAATTTCTCGCCTGAGAACAAGATTGGGGCTGGAAGCTTTGGAGTTGTGTACAGGGGAAAGCTTGTGGACGGCCGTGAGGTGGCGATCAAGAGGGGCGAGATTGGCTCTAAATTGAAGAAGTTTCAAGAGAAAGAAAGCGCGTTTCAGTCCGAATTGTCCTTTTTGTCGCGGCTACACCACAAGCACTTGGTTAGGCTAGTTGGTTTCTGTGAGGAGAAAGAGGAGAGGCTCTTGGTTTATGATTACATGAAGAATGGTGCATTGTATGATCATTTGCACGCCAAGAACAATGTGGAGAAGAGTAGCAGTGTCTTGAATTCGTGGAAAATGAGGATCAAAATTGCCTTGGACGCCTCCCGGGGGATAGAATATCTCCACAATTATGCGGTTCCATCCATAATCCATAGAGATATCAAGTCTTCCAACATCCTCCTCGATGCGAATTGGACTGCTAGGGTATCTGATTTTGGATTGTCTTTGATGAGTCCAGAGCCAGACCGTGATCATCGGCCGATGAAGGCAGCCGGAACGGTTGGATATATTGATCCTGAGTACTATGGCCTAAATGTGATAACAGCAAAGAGTGATGTCTACGGCTTTGGAGTAGTTCTTTTAGAACTATTAACCGGAAAGCGAGCGATATTCAAGAATGGTGAAGATGGCGACACACCAATGAGTGTGGTGGACTTCGCGGTGCCTGCAATTTTGAGTGAGGAATTGGCGAAGATTTTGGACCCTAGGGTTGGACCACCAGATGCAAATGAAGCTGAGGCAGTGGAATTGATGGCAAAGATTGCAATGCTTTGTGTGAATTTGGAAGGAAAAGATAGACCAACCATTTCTGATATTGTTACCAATTTAGAGCGTGCATTGCTTCTTTGTGAAGGTTCTCATCATCATGATAGCAATTCCAGTGGTATAATCTCCATTGTCTCAGATTGA 2442 0.4799 MMTPLSSSEILRLSAAVIFTLSLLIPTSHALGSGATLAVTDASDTVCGVVAGESTQRIECSRLGSQLVPAVPPNISFSTVSGGATFFCGLRSGNRTLLCWNTITTTNGTFTPKRLYNNDTVLLENLAVGETHVCATVVGAGTVTCWRTSKTFKSPSRSLQFSSISSGSGFSCGILKNSSQVRCWGETVISRVIENGFKNMSMWSIVAGGSHVCGLNSTGFLVCIGDNDNFGQLDVPKNEAWEFGELALGASHGCALRRLNGTGSVVCWGGDGNFTSEVTKGVSFEVIVSGSNFTCGLVTRNLSVLCWGPGWPNNNGSRFELPLPSVLPGPCVQSSCDSCGPYPDSQSLCSDSDSNICKPCWPPIQAPAAAMVPSSLPPGPAPRQRSRSRTLTRGLLAFAIVGSVGAVAGICTIVYCLWNGVCFGKKKVHNSVQPTITRGSSTSSGVSNNSRNNSRPLSRTSTIMRQGSRIMRRQRSGTSSTKHPDRAEEFALAELIAATDNFSPENKIGAGSFGVVYRGKLVDGREVAIKRGEIGSKLKKFQEKESAFQSELSFLSRLHHKHLVRLVGFCEEKEERLLVYDYMKNGALYDHLHAKNNVEKSSSVLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDANWTARVSDFGLSLMSPEPDRDHRPMKAAGTVGYIDPEYYGLNVITAKSDVYGFGVVLLELLTGKRAIFKNGEDGDTPMSVVDFAVPAILSEELAKILDPRVGPPDANEAEAVELMAKIAMLCVNLEGKDRPTISDIVTNLERALLLCEGSHHHDSNSSGIISIVSD* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1507 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Amo20g1507 813 SUPERFAMILY RCC1/BLIP-II 27 271 IPR009091 -
Amo20g1507 813 Gene3D Transferase(Phosphotransferase) domain 1 583 804 - -
Amo20g1507 813 Pfam Protein kinase domain 504 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g1507 813 Gene3D Phosphorylase Kinase; domain 1 463 582 - -
Amo20g1507 813 Gene3D - 25 196 IPR009091 -
Amo20g1507 813 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 9 804 - -
Amo20g1507 813 SUPERFAMILY Protein kinase-like (PK-like) 480 787 IPR011009 -
Amo20g1507 813 ProSiteProfiles Protein kinase domain profile. 502 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g1507 813 CDD STKc_IRAK 508 789 - -
Amo20g1507 813 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Amo20g1507 813 Gene3D - 197 323 IPR009091 -
Amo20g1507 813 SMART serkin_6 502 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g1507 813 MobiDBLite consensus disorder prediction 434 461 - -
Amo20g1507 813 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 9 804 IPR044815 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1507 Amo-Chr20 36269709 36272558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1507 1 813 Receptor kinase-like Gene Family AT3G55950 58.831 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Amo20g1507 Pkinase 3.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1507 - - gmx:100786639 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1507 20 36269709 36272558 Amo20g1507 20 36269709 36272558 ECH