Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1482 ATGAAGCAGGGAGTATTGACCTCTGGTCGCGTTCGCCTCTTGCTCTATAGAGACCTCTCTGTTCTGAACTTGGTAATTATGAAGAAGGGTGACAATGATTTGCCAGGCCTGACAGACATTGAAAAACTAAGGATGAAGAGTCCAAATAGAGCTGTAAAAATTCGTATGTTGTTCAATCTTTCCAAGCAAGATGATGTGAGAAAGTATGTCAACACATACAGGAGGACATTCATAACCAAAAATATGCTTGGTCATGCCACTAAGAAGAGGCTACTCCTCATATTAAAGGAGAATGGTTTTTCTAATTCTGCCCACGCGCCGAAAACTCCTCATCCCACCCTCCACAACACCGTCCTTCTCTCTGCGTCTGACGTCACTGGACAGCACCCTCGCAGTGGCCCTTCTTTATCGCGCTTCCCTCTTCTCGGCTCGGTCTTTTCTCCCCCTCCCTTCCTTATCGCGCTTCCTTCTCCTAGTTGCACACTAACCCTCAGTCAGAGAGCGAGCCCAGACCCTAGAGCTCCCTTCCCTTTCCTCTACACAGCACCGTCTCTGATATTGCAGCGTTGTCTTCAACATCATAGGTCGCAGGTTGCTGATTGCAACACCGTAATCGTCCTCCACTACTCTGCCATACGTCTCAGTCCAGTCCAGGAGTGTCGTTGTCCATCTCAGTCCAATCTCGTTGCCCCCGTAGCAGCCGCCGACCTGCCGGGTCTCATTGTCCAGCATCTCCATCTTCCTTCTTTGTAG 753 0.4954 MKQGVLTSGRVRLLLYRDLSVLNLVIMKKGDNDLPGLTDIEKLRMKSPNRAVKIRMLFNLSKQDDVRKYVNTYRRTFITKNMLGHATKKRLLLILKENGFSNSAHAPKTPHPTLHNTVLLSASDVTGQHPRSGPSLSRFPLLGSVFSPPPFLIALPSPSCTLTLSQRASPDPRAPFPFLYTAPSLILQRCLQHHRSQVADCNTVIVLHYSAIRLSPVQECRCPSQSNLVAPVAAADLPGLIVQHLHLPSL* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1482 250 PANTHER 40S RIBOSOMAL PROTEIN S6 17 82 - -
Amo20g1482 250 Gene3D - 44 117 - -
Amo20g1482 250 PANTHER 40S RIBOSOMAL PROTEIN S6 17 82 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1482 Amo-Chr20 34499925 34501525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1482 1 81 Cytoplasmic Ribosomal Protein Gene Family AT4G31700 58.333 1.44e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1482 K02991 - oeu:111409065 124.79