Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1469 ATGATCTCCTACGGCGATGTTCTCCTCCGGCGGCGCGTTCTCCTCCTCTGTCAAGATTTTTTCCAGATTTGTGAGCTTCTCCTCCTTTTTCGAGCTTATGCTTTGCTAGCTTCTCCTCATGCATTAACGTGCCTTCTCCTCCTCGATCTATTTCTCAAAGGATCAAACATTGTTAACGCTGTTGGTCGCCAAGGTTGCCTAGTATTCATTAATACTGCTACTTCATATGATGAGGAACACATAGATTCTTTGTATTGCTCAGAACCACATTATTTTGATGATGAGGAACATGATCATGTGTTTCTAGAACAAGACATGTTGTGTGATGATTCAGAGTTGAAAACTCTTAAGAAGCAACCATGGTTGAAAACTTTTTCATTCTCTACTCTCACAGCTTCTCTTGCTATTAACTACCTTCACAGATTCCTCTTCACCTTCACCGTGAAGAAGAAGCAGTCATGGTTGACTTATCTTGCTACAGTTGCTTGCATCTCTCTTGCTGCTAAAATGGAAGAGACACAAGTTTCACTTCCTCTTGATTTACAAGTGGAAGACAACAAATATGTGTTTGAGGCAAAAATAATAAAGAAAATGGAGATTTTGGTACTTTCAACTCTTGAGTGA 624 0.399 MISYGDVLLRRRVLLLCQDFFQICELLLLFRAYALLASPHALTCLLLLDLFLKGSNIVNAVGRQGCLVFINTATSYDEEHIDSLYCSEPHYFDDEEHDHVFLEQDMLCDDSELKTLKKQPWLKTFSFSTLTASLAINYLHRFLFTFTVKKKQSWLTYLATVACISLAAKMEETQVSLPLDLQVEDNKYVFEAKIIKKMEILVLSTLE* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1469 207 SMART cyclin_7 120 204 IPR013763 -
Amo20g1469 207 Gene3D - 121 207 - -
Amo20g1469 207 SUPERFAMILY Cyclin-like 123 206 IPR036915 -
Amo20g1469 207 CDD CYCLIN 123 203 IPR013763 -
Amo20g1469 207 Pfam Cyclin, N-terminal domain 123 207 IPR006671 -
Amo20g1469 207 PANTHER CYCLIN D3.1 PROTEIN 124 207 - -
Amo20g1469 207 PANTHER CYCLINS 124 207 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1469 Amo-Chr20 33949346 33950574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1469 81 207 Core Cell Cycle Gene Families AT4G34160 39.394 1.16e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1469 K14505 - csin:114281778 126.331