Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1434 ATGGGGCCTACTGAGATCCCTTCTCAGTCAACGGAGACTATTAAGATCCCTACCACTAACTATGAGTTTGGTGCAACCTTCATTGATCATCCCAAGTTGATGCTGTTGGGGAGAATATTGATTGATGGAAGGCTCAATGCAAGAGTCAAGTGCGACGTCTTTGAAAATCTCACTCTTAAAGCCAATGCTCAGCTTATGAATGAGCCACACATGTCTCAAGGGATGGTCAACTTTGATTACAAGGGGATTATGGAAGAGTTTGAGACAGGGGAGTGTGAAACAAGGGATTCATGTAGTGATACCTTGAGCGATGAGAGTGAGTGTGAGAAGTTATGGAGATGGGATGGGAGTTCCTCAGAAGAAGGTGGAATGAATAATGTAGAACAAGATTCTCATCAATTGCATTTTAATGATAGATTAGGTCATCTCTATTGTCAATACTTTGAGAGATCAACTCCATATGGAAGAGTTCCTCTAATGGATAAGTTGACTGAACAAAAATTGACAAGAAAGGAAGGTATAAGCTTTTCTTGTTTGAGGAAGCTTGCAGACAAGATTGAAGCTTCTGGTTACTATGTTGTATGCAACTTGAAATCCTCATTTCTTGCTGTAGCTGATGATAGTGGTGAGGTGAAGACGGTACAAGAAGACAAAGCTCTTATCTGTGAGGACTGGAAAGAAAATATTTTTCCCCTATTAGATTCAGCGCCTTCAAGGCTTAACCCAACATTTTTTGGTATAAAACAATACTTTGCTGCAAAAAGTCTTATTTCTTCACGGGGTTTCGAGATAGATGATTTCCATGGTTTTGGTATGACCAAGCAGACATTTATTTGCGTGATCCTGACCTGGAGGCTTTCATATTCTAATGGTGTTTGTACCGTCATGTGCTCCAGATTCAATCATAAAACAGGGGCCGAGGATGTGCATTTCACCGCCTCATCTAATTCTGTAGCTGATGATGATGTCGTTGATGATAATAGTAACAATGATGAGGTATCACATCGTCATATTAATTATTTCTTTGCTGTTACAACTTACAATTATGCCTCTCACTCTCACTCTTTCGCAATTCTGAACCTTTTAGCTCATCACTTTGTTGCATTAAAACATAGAGGTATACTTTATTTTGGACAATGCTACTACTTAGCAAGCTTGCATTCAGCTACTATGTGGAGTCAGGAGATATCAAGATTAACTTTCAATGTGAAGCTTGATGCTGCCGATGCAATTTAG 1236 0.3948 MGPTEIPSQSTETIKIPTTNYEFGATFIDHPKLMLLGRILIDGRLNARVKCDVFENLTLKANAQLMNEPHMSQGMVNFDYKGIMEEFETGECETRDSCSDTLSDESECEKLWRWDGSSSEEGGMNNVEQDSHQLHFNDRLGHLYCQYFERSTPYGRVPLMDKLTEQKLTRKEGISFSCLRKLADKIEASGYYVVCNLKSSFLAVADDSGEVKTVQEDKALICEDWKENIFPLLDSAPSRLNPTFFGIKQYFAAKSLISSRGFEIDDFHGFGMTKQTFICVILTWRLSYSNGVCTVMCSRFNHKTGAEDVHFTASSNSVADDDVVDDNSNNDEVSHRHINYFFAVTTYNYASHSHSFAILNLLAHHFVALKHRGILYFGQCYYLASLHSATMWSQEISRLTFNVKLDAADAI* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1434 411 Pfam Eukaryotic porin 14 82 IPR027246 GO:0005741|GO:0055085
Amo20g1434 411 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40 1 82 IPR037930 GO:0005741|GO:0008320|GO:0030150
Amo20g1434 411 Pfam Protein of unknown function (DUF789) 92 165 IPR008507 -
Amo20g1434 411 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40-1 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1434 Amo-Chr20 32282811 32288447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1434 212 336 NAC Transcription Factor Family AT3G56570 47.287 2.07e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1434 K11518 - adu:107462179 174.481