Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1401 ATGGATGAACAGAATGAATTCGAACAAGATTTCGGAGATTCATTTACCGAGGGAGCGTATTTTTCTGAATCTGATCAGTCAGAAGATATCCTTGAAGTTGCTTATGCGGTTGACTCTGTGCAAGACATTACAACTTTGAAATTTAGTGAAAATTTTGCGGAGAAAATTGGCAAATATCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATCTGAAGTACTCAAAGTCAAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTATTGGCAAGATTTACAAACAAAAGTTTGTATGTCATAGGCAAGGATTCAGGGAGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCTCGAATGGATCATTTTCAAAGGTGTGTTGCACACTTGCACTTTAAAGAATTTAATACTGATTATGAATCTACACGTGGGGTGCCCGTCATGCAGACTTGTATAGAGATGCTAGAGAGATATGCTAATGAGTTATACACTCATGAGATATTTCTTTTCTTTCGGCCATTTCTCTCTAGAGCTGGATCAATGCGGGTGCTAAACATAGAGAATAACGATGATTGCATAAAGTACATTATGTGTAAGCATGGGAGGCCCGATTTTATGTGGACCGTTGATTTTCATCAAGAAGAAATGATCTTCATGTGTACCTGTTTAAGAATGAAGTCATTTGGAATTCCCTGCGAACATATTGTGAAAGTTCTGGTTGACAGAGACATTTGTGAGATTCCCCGGTCATTGGTATTGGATAGATGGACAAAAGAGGTTAAATCAGCACTCAATGATCCAAGTGGGTTCACCAGGGATGCTGTTGTTATTAGTCGTCAAAGTGCCTTGATGGAATTTTCTAAACAATTGGCTGCTGTTGCTGCTAAAGTACCAGAGAGATATGAAGAGACACGTGACCTAATTATGGGATTGTACTCATCTTACAAGGCTGCAGACGAAGGCACTAATCAACCTCAGTCAGGTGTAGCTAAAAGTAGCAATCTGTATGTGCATCAAAGCGGTGTAGGCTCAGGACAACCATCTAGGAAGAAGTGGCAACATTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTTCTTGGCAAAAGGACATTGACAACAACGTTATTGAAGATGAAGCTAATGGTTCGGATGATGCCGACGTATATCCAGAACCGACGGCTAAAATCAGAAAAGCAAATCTTCAAAGTCTGTATATTAGGGTTCTGCCGGTAACGTCTGTTATTGTAGGCGCCTCCGTGGCCTCTTCCTTCTTTCTGACTAAAAATCGGTTTTTGGTTTTGCCACAATCTGAACCGAATCAAACCGGTCAAATAGAAAACCCAAAAAAACTATTAGAAAGCTTGGTCGGAAAACTGGACCGAACTGGCCGGTCGAACCGAAACCGTTGTTTTAAAAACCAGCACAAACTGTTGAACCGGCCAAAAATAGGCCGGTCAAACCGGACCGAAACCCGGCCAGGAAAATGCCCTAGCCTCCACCAAAGAAATCAAACCCTAGCCTCTACCAATCTTGTCGCAGTCTATCGGAGTGAGAGACTGCTGCTGCCGCCTCCGTCGGACTCAAGAACTTCCATCTTCGTGCTATCGGCGTTCGTTACTTCGCTCTCACCATCCCCTATTCGCTCTCATGAGTCACCTGTTCGCTCTCCATCCCCTTTTCGCTCTCATCAGTCGCCTGTTTGCTGTCGTCCATTGTGCTCAACCGCTCTCCGTCGTCCGTCAAAGGTTAGTGGAAATGGAAGCTCTGACATTTTTGTCAAGCTGAATATGCAACCCTCCGCGACTATAACACTTGGTTGGCTTGTTCTTGATTCTATGAACTTTTTGTTCTATTTTGATTTAGGTCCCTTTTTGCTTTTCTTATTGCTTCTTGAGTTTTCTGAGTCAGACAGAGTTTTAAATCACCTGATATATATACATCGTATAGAAGTAATAATTCATGAGCCACGAAGTGTTCACATACAAAATATAAATATATTGCTATTGCAATCTATTCCCACTCCTGGTCAATGGGTAGCATTGTTGAGTGGAAAATGGTATAAAAATGAAGACTTTGATGATTCGAAATAA 2142 0.4132 MDEQNEFEQDFGDSFTEGAYFSESDQSEDILEVAYAVDSVQDITTLKFSENFAEKIGKYHFSTLQLAFDFYLKYSKSKGFSARKSKTFKNSIGKIYKQKFVCHRQGFREEKYYTMEKRKKEPRLETRTGCEARMDHFQRCVAHLHFKEFNTDYESTRGVPVMQTCIEMLERYANELYTHEIFLFFRPFLSRAGSMRVLNIENNDDCIKYIMCKHGRPDFMWTVDFHQEEMIFMCTCLRMKSFGIPCEHIVKVLVDRDICEIPRSLVLDRWTKEVKSALNDPSGFTRDAVVISRQSALMEFSKQLAAVAAKVPERYEETRDLIMGLYSSYKAADEGTNQPQSGVAKSSNLYVHQSGVGSGQPSRKKWQHCSVCQMEGHKKTTCSWQKDIDNNVIEDEANGSDDADVYPEPTAKIRKANLQSLYIRVLPVTSVIVGASVASSFFLTKNRFLVLPQSEPNQTGQIENPKKLLESLVGKLDRTGRSNRNRCFKNQHKLLNRPKIGRSNRTETRPGKCPSLHQRNQTLASTNLVAVYRSERLLLPPPSDSRTSIFVLSAFVTSLSPSPIRSHESPVRSPSPFRSHQSPVCCRPLCSTALRRPSKVSGNGSSDIFVKLNMQPSATITLGWLVLDSMNFLFYFDLGPFLLFLLLLEFSESDRVLNHLIYIHRIEVIIHEPRSVHIQNINILLLQSIPTPGQWVALLSGKWYKNEDFDDSK* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1401 713 Pfam FAR1 DNA-binding domain 69 151 IPR004330 -
Amo20g1401 713 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 52 138 IPR031052 GO:0006355
Amo20g1401 713 PANTHER OS01G0607050 PROTEIN 52 138 - -
Amo20g1401 713 PANTHER OS01G0607050 PROTEIN 135 320 - -
Amo20g1401 713 ProSiteProfiles Zinc finger SWIM-type profile. 219 257 IPR007527 GO:0008270
Amo20g1401 713 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 135 320 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1401 Amo-Chr20 30722471 30727657 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g1401 FAR1 4.3e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1401 - - adu:107457867 504.597