Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1400 ATGCAGCTTATAACTTGTATATACGTTATGCGAGGTGTCTCGGGTTTGGAGTTCGCAAGGGTGATACATCACGTGGAAAAGATGGAACACAGCAGAGCCGAGAAATACATATCTAGTTCGAGTAGGAAGAGAGAGCATAGAGCGCTGACTCGCACTGTTTGTGAAGCCATGCTTGTGGTGTATTTTGACACCAAAACTTCGACTTGGAGGGTTAAAAAATTAGTCGAGAAGCACAATCACGATCTTGTCCCACAATGCTTGGTACACCTAATTCCAAACCACCGAGGGTTGACTGAGGCACAAAAAGCTCAGGCGAATACCATGCATGTTCATGGTCTTCCAACCTCTAAAATAATGGGATTAATGGTAGGCTAA 375 0.4427 MQLITCIYVMRGVSGLEFARVIHHVEKMEHSRAEKYISSSSRKREHRALTRTVCEAMLVVYFDTKTSTWRVKKLVEKHNHDLVPQCLVHLIPNHRGLTEAQKAQANTMHVHGLPTSKIMGLMVG* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1400 124 Pfam FAR1 DNA-binding domain 39 84 IPR004330 -
Amo20g1400 124 PANTHER OS02G0262500 PROTEIN 31 123 - -
Amo20g1400 124 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 123 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1400 Amo-Chr20 30663234 30663643 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g1400 FAR1 7.8e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1400 - - ahf:112717474 179.874