Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1390 ATGGCAACCATGACATCGTTGAGCTCTTCCTTCCTCAAGCAATATGATTTTTTCCGTCTGATGACCCCTACGCCACCTCGGGAAACAAACCTTTCATTCACCTACAGCCCTAAGATTCATCAATCTCTCTCTCTAAGCACTGCACCAAACAACAAAAAACGCATAACAACAGTGGCAGCTACCCCGCCGAAAAAGGAGATATTTCACGAGTTCGACTTCTTTGTTGTCTACACAGACGGAACCGTGGAGGTCCTCCGTCCTCTACCAGCATTCGTTCCTCCCTTCGAACTCCACATCAAAGATGCTGAAATCACCACCACCAACCCTCGCCTCATCGCTCGCCTCTTCCTCCCAAAAAACCCTGACAACAGAAAACTCCCCGTCGTCCTCTACTTCCATGGGAGTGGCTTCTGCTCCAGGTCTGCCCTTTCTCCAGAATATACTAACCATCTCGCCGACATCGCCAATCAATCCAACGTCCTTGCTGTCTCCGTAGAGTACTCCAAGTTCCCGGCCCGACCACCACCTGCTTGCTACGAGGAGGCCTTGACCTCCCTCGATTGGATTGCGTTGCACGCAAACGGGGCCGGGCCGGAGCCTTGGCTAAACGACTACGCCGACCTGCAGCGTGTTTTCATCGCCGGAAACAGTGCTGGCGGTAACATCACCCATTACGTGGTCAGCCAAGTGGGAAAAACAGGACCACCGAATGGTATAAATGTGGAGGGTGCGATTATGGTGCACCCTTTCTTTGGTGGATTAGGGGAAGATAGGCAGTGGCTGTATATGTGCAAGGATAATAAGGGGCCAGAGGATCCAAGGCTGAAACCGGCGGCGGAAGATTTAAATACGCTTGGGTGTAGGAGGGTTTTGGTGTGTGTGGCGGAGACTGATCCGTTGAGACCTGCTGGAGAGAACTACTTTAGGGATCTGAAGAATAGTAGTTGGGGTGGGCGTGTTGAGCTGGAACTGAATAAGGGTATTGGACATTCCGATCAAGTTTATAAGCCATATGACGAAAACTCTCGTCTCGTCGTGCCAAGGATTGCTACTTTCATTAAGCAACAATGA 1071 0.5089 MATMTSLSSSFLKQYDFFRLMTPTPPRETNLSFTYSPKIHQSLSLSTAPNNKKRITTVAATPPKKEIFHEFDFFVVYTDGTVEVLRPLPAFVPPFELHIKDAEITTTNPRLIARLFLPKNPDNRKLPVVLYFHGSGFCSRSALSPEYTNHLADIANQSNVLAVSVEYSKFPARPPPACYEEALTSLDWIALHANGAGPEPWLNDYADLQRVFIAGNSAGGNITHYVVSQVGKTGPPNGINVEGAIMVHPFFGGLGEDRQWLYMCKDNKGPEDPRLKPAAEDLNTLGCRRVLVCVAETDPLRPAGENYFRDLKNSSWGGRVELELNKGIGHSDQVYKPYDENSRLVVPRIATFIKQQ* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1390 356 SUPERFAMILY alpha/beta-Hydrolases 60 355 IPR029058 -
Amo20g1390 356 Pfam alpha/beta hydrolase fold 261 331 IPR013094 GO:0016787
Amo20g1390 356 Pfam alpha/beta hydrolase fold 129 252 IPR013094 GO:0016787
Amo20g1390 356 Gene3D alpha/beta hydrolase 78 355 IPR029058 -
Amo20g1390 356 PANTHER ARYLACETAMIDE DEACETYLASE 65 354 - -
Amo20g1390 356 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE-LIKE 65 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1390 Amo-Chr20 30240682 30242000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1390 71 356 Carbohydrate Esterase AT1G19190 36.538 2.84e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1390 - - ahf:112784641 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1390 20 30240682 30242000 Amo20g1390 20 30240682 30242000 ECH