Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1373 ATGACCGTCGCACCACCCAGCTCGCCTTCATCTAACCCTCACACCCAGCCCTCTCTCTGTCGCACCCTAGTTGTTTCTCAACGGTCTCTCGCACCATCAACGCTGCTCCGTCTACGCACCCAGGAATCGGCGCTGCTCCATCCACGCACCCTCGTCGGATTCGGAACCTCCATCGGCGAGGAGAAGAGGAAGAGGAAAACCTTAGAGGAGAAGCCCTCCGCCGATTCCGCAATCGAAGCTTTGGAGAAGAAGAGGAAGTACCACGAGTCAATTGAAGAGGAGGAACAAGACTCACACCCTCTGTGTGAGGTGCGGCCACTGCAGCTTTCACCTCCAGAAGAGTCGCTGCTCCGCCTGCGGTTCCCCCACTGCACGCAAGATGAATTTTTAATCCTCACTTCATTCACCGATTCTCTCTTTTTCCTCATATTCCGATTCATCTCTTTTTGCTTGCTTCATTCATTGCAGTACGAGAAGGTTGAGAAGATTGGGGAAGGAACCTACAGCGTCATTTACAAGGCTCGCGACCACGTTACCAATGAGACCATCGCTCTCAAGAAGATTCACCTTGAGCAGGAGGATGAAGGCGTTCCTAGCACTGCAATTCGCGAGATTTCTCTCCTTAAGGAAATGCAGCATAGGAATATTGTTAGGTATTCTTTTCTTCATCCTAATCTCACTTCTTCTTGCTATTATTATTTGAATGCGTGTATCTCTGATGAATGCTGCTTTTTAGTAATTTGTGTTTATGGTTTCAATTGGTGA 765 0.4889 MTVAPPSSPSSNPHTQPSLCRTLVVSQRSLAPSTLLRLRTQESALLHPRTLVGFGTSIGEEKRKRKTLEEKPSADSAIEALEKKRKYHESIEEEEQDSHPLCEVRPLQLSPPEESLLRLRFPHCTQDEFLILTSFTDSLFFLIFRFISFCLLHSLQYEKVEKIGEGTYSVIYKARDHVTNETIALKKIHLEQEDEGVPSTAIREISLLKEMQHRNIVRYSFLHPNLTSSCYYYLNACISDECCFLVICVYGFNW* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1373 254 Coils Coil 77 97 - -
Amo20g1373 254 Pfam Protein kinase domain 157 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g1373 254 SUPERFAMILY Protein kinase-like (PK-like) 156 222 IPR011009 -
Amo20g1373 254 PANTHER - 155 219 - -
Amo20g1373 254 ProSitePatterns Protein kinases ATP-binding region signature. 163 186 IPR017441 GO:0005524
Amo20g1373 254 ProSiteProfiles Protein kinase domain profile. 157 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g1373 254 Gene3D Phosphorylase Kinase; domain 1 155 236 - -
Amo20g1373 254 PANTHER CELL DIVISION PROTEIN KINASE 155 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1373 Amo-Chr20 29601656 29602475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1373 156 218 Core Cell Cycle Gene Families AT3G48750 90.476 3.46e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Amo20g1373 Pkinase 2.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1373 K02206 - adu:107472072 187.193