Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1372 ATGCAAATTGGTGAGTCCTCCAAGATTCTGATTAATGTGGTCACATTCAATCAAGAGGATTTTGTGGAGAGCCAGCATCCAGAACTCTATGATAATGGACAATGTTGTTGTGCTGGGTCTCGAACCTTTGTATATGAGCATATCTATGATGAGTTCTTGGAGAAGTCAAAGAAACGTGCTTTGAGACGCGTTGTTGGTGATCTATTCAAGAAGGGTGTTAAACAAGGCCCTCAGCTAAAAGTTCTCCCTCTTCAAAGTGGGGATCTGTTAGACCTTCTATGGGACATCCTGAACCATTCGATTTCAGATTTGTTGCTGTTGGAAATGAAAATTGTTTTCCTCATCATGAAGTGCACTATCAAGGCAATCATTCTTTAA 378 0.4048 MQIGESSKILINVVTFNQEDFVESQHPELYDNGQCCCAGSRTFVYEHIYDEFLEKSKKRALRRVVGDLFKKGVKQGPQLKVLPLQSGDLLDLLWDILNHSISDLLLLEMKIVFLIMKCTIKAIIL* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1372 125 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 21 97 IPR016163 GO:0016620
Amo20g1372 125 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 21 79 - -
Amo20g1372 125 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 29 40 IPR016160 GO:0016491
Amo20g1372 125 Pfam Aldehyde dehydrogenase family 30 79 IPR015590 GO:0016491
Amo20g1372 125 PANTHER MITOCHONDRIAL ALDEHYDE DEHYDROGENASE ALDH2A 21 79 - -
Amo20g1372 125 SUPERFAMILY ALDH-like 30 79 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1372 Amo-Chr20 29588872 29590082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1372 22 81 Aldehyde Dehydrogenase Gene Family AT3G48000 67.213 1.42e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1372 K00128 - aip:110265010 166.392