Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1343 ATGGAAAAAGAAGGAGGAACCATCGTATCGGGTGAAGATGGTATTACCACAATTTGTGTGCCTAGGAGGGATAGTTACTTGCATTCTGTAGGCATGTGGGTTGGAGATAATCCATTTGATTTTGTTGTTCCTGTCACGTTGTTCCAAATCATTATCTTCATTATAGCTTCCCGAATATTGTACATTGTTCTCAGGCCTCTAAGCACACCCAAATTCGTCTGCTATGTTCTGGGTGGCATTCTCGTAGGACCATCAATTTTGGGCAACCATTTATTTGAAGTTGTATATCCTCCTATACAATCTCCAATTTTATTCTTGTTGGGAAGGTTAGGTGCTGCATATAGTGTGTTCTTCATTACACTGAAAATGGACATAGTCCCAACTATAAAAGCAGCAAAAAAATATTGGAAATTAGGTTTCATGCCGTTCTTAAGTTCTTTTCTTGTTATGTACACCCTAACACACTATACCAACTTGGAATATAGAGGTAAATTAAAGCAACCAAGCATCCCTTGTTGGACTAGTTTTCCGGTTGTCTCAGATTTCTTGATGGAACTCAACCTTATAACTATGGAAATAGGTCAGATCGCTCTGTCTACGGCTATCGTGTCCGAAATGTGTCAGTGGGTCGTGTTGATAACCTACGTGTTAGCGACAAACACACTAAACTTCTCGTTTGCAAACCTAAGTTTCCTTGTGGCCTTCTTGATGTTCTTGTGCTTTGTTGTAAGACCAATAATGAAGGTGATAATTAAAAAAACACCAAAGGGGGAACCGGTAAAACAAGGTTATGTTATTATGGTCCTTCTAGGTGTTATTGGCATGGCAACAATTAGTGATATCATTGGAATAACGTTCATAATGGGACCCACACTTTATGGTTTGTTTATCCCTAATGGTCCCCCTCTGGCAACAACAATAGTGGAGAGGTCTGAAGTTGTTATATCGGAACTTATTATGCCTTTTTTCTATTTGACGTTAGGCACAACCACAAAAATAAGTAGCATTATTGATGAATATTGGTACCAAAATTTGATGGTTGAGTTTGTTGTATTGTGTGGGGTCACGACAAGAGTGCTTGTAACTATGGTCCTTGGTATGGCGCATAATTTAAGATTAAAACATGGGTTTATTCTTGGTCTTATGATGAGCATTGAAGGCATACTTGACCTAATCTTATTTCATGGGATGATGAGAGCACAGATTTTTGAAGATTACATATTTGTTATACTCGAGCTTCATGCTTTGTTGATAACCGCTATTTCTGCACCATTGATAAAGTTCTTATACAAACATCATCCTCGTTTGTCAAAAGAACCAAGTGCACATGATGCAAGAGTGAGAACAATCCAAAGAACTTCTTTAACATCAGAATTTAGCATCATTTCTTGCGTACACAAAGACACAGATGTTCCTAGCATGATTGCGCTTCTAGAATCCTTTAACACCTACCAAGAGAGTCCTCTGTGTGTCCACGTCATACACCTTGTTGAGCTCTTGGGAAAAAGTACACCCATTCTTCTTCCTTTGAAAAAGAAAAACAAGAAGGTCAAATCATCCGCCATTTATCTTGAAACCAACCAGATCATGCGAGCATTTGAGAATTACTCGCAAAACTCTGCAGGTGCGGTAACCGTGCTTTCGTATGTCAACATTGCGCCTTACAAGATCATGCATGAGTCTGTTTGTAATCTTGCCGACCACAACCGGGTACCTTTGATTCTCATCCCTTTCTATGAATACAACCAAACCATTAATAGCCATGACGGAACCTTTATTCGTGACCTTAACACCTCCTTTCAACTAAATGCAAGATGCACAATAGGCATCCTAGTGGACAGATATTCAACATTGGCTTTGAATGCATCCTTATCATGTTTTCATGTGGCTATCTTCTTCCTTGGTGGGCAAGACGATAGAGAAGCACTAGCATTAGGTATTAGAATGTTGGACCGTATAACCATAAAGGTCACACTAATATTGGACGAATGCTTGGTAGATGAATTCAAGGGGAAGAAGATTGTCCACAACAATGCTAATTTTCATGAAATTTTGGTAGAAGATTCCATAGGTGTTTTAGAAGCGATTCGGGGCATGGAGATGGAGATATATGACCTTGCCATTGTCGGAAAGAGGCATCAATCTATGAGTATCACGGATGAAGAAATGATGGATTTTATGGACAACGCGGATCAATTAGGAGTTATTGGCGACATGTTAGCGTCCACAGAGTTTTATGGTGGGAAAATTTCACTCTTGGTGATGCAATGTGGAGGGAGGAAGGTTTTGGAAAAGAAAACCTCTACTAATCGAGGTTTAAAACTTTAA 2328 0.3926 MEKEGGTIVSGEDGITTICVPRRDSYLHSVGMWVGDNPFDFVVPVTLFQIIIFIIASRILYIVLRPLSTPKFVCYVLGGILVGPSILGNHLFEVVYPPIQSPILFLLGRLGAAYSVFFITLKMDIVPTIKAAKKYWKLGFMPFLSSFLVMYTLTHYTNLEYRGKLKQPSIPCWTSFPVVSDFLMELNLITMEIGQIALSTAIVSEMCQWVVLITYVLATNTLNFSFANLSFLVAFLMFLCFVVRPIMKVIIKKTPKGEPVKQGYVIMVLLGVIGMATISDIIGITFIMGPTLYGLFIPNGPPLATTIVERSEVVISELIMPFFYLTLGTTTKISSIIDEYWYQNLMVEFVVLCGVTTRVLVTMVLGMAHNLRLKHGFILGLMMSIEGILDLILFHGMMRAQIFEDYIFVILELHALLITAISAPLIKFLYKHHPRLSKEPSAHDARVRTIQRTSLTSEFSIISCVHKDTDVPSMIALLESFNTYQESPLCVHVIHLVELLGKSTPILLPLKKKNKKVKSSAIYLETNQIMRAFENYSQNSAGAVTVLSYVNIAPYKIMHESVCNLADHNRVPLILIPFYEYNQTINSHDGTFIRDLNTSFQLNARCTIGILVDRYSTLALNASLSCFHVAIFFLGGQDDREALALGIRMLDRITIKVTLILDECLVDEFKGKKIVHNNANFHEILVEDSIGVLEAIRGMEMEIYDLAIVGKRHQSMSITDEEMMDFMDNADQLGVIGDMLASTEFYGGKISLLVMQCGGRKVLEKKTSTNRGLKL* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1343 775 PANTHER CATION/H+ EXCHANGER 3 16 761 - -
Amo20g1343 775 PANTHER CATION/H + ANTIPORTER 16 761 - -
Amo20g1343 775 Pfam Sodium/hydrogen exchanger family 51 421 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo20g1343 775 Gene3D - 45 438 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1343 Amo-Chr20 28675148 28679320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1343 25 756 Antiporter Super Family AT2G13620 30.396 3.81e-111 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1343 - - aip:110268392 1401.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1343 20 28675148 28679320 Amo10g1022 10 19041244 19045209 hybridization