Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1305 ATGGGTAAAAACTACGATTATGTTTCTGATGTTAATGTGAGAAAGCTTTGTTGGAACTTTAAGTTCAACGAGAAGGAGGTTGGAAACATAGAGATGATCCTTCAAGATAGTAAGGGCCATGCTTCAATACCCAAGTCTATAGTTAAGAAATGGAGTGGTGTATTTCAGGTGTTTCAGATGACGGAGGTCAATCACGTTATGAATCCTACTTTTCCTCTTGATGCATTTGTGTTCAAGACTATACCGGAATCGCTCACGGCCAAGAAGATCGAAAACTCAGAGCTATTTGACATGATTGGTGAGGTAGTTGGAAAGCATGATCCCAGAGAGTTGGTCACCAACAAAGGGAAGGAGAGCAAACGGTTGGTTGTGGTGTTGCAAGATCTGGAAAAAAATATGATTAACTCCACTTTATTTGGTGAAATGGTCGATGAGATACTACCACATTTGGAAGATGGAAGGCTGGAGTCACTTATTGTAGTTATACAATACTTTAAGGCAATTAGGTGGAATGGAAAAACTTCGGTCCAGAGTCATTTTGAGATCTCCAAACTCCACATCAATGCAGAGTTGAAGGAGGTTGTTGGATTTAGAAACATATTGCTAAAGGAGGCACCATCCAATGCTTCAAGAATAAGTCAAATGTCATCCCAGAGTGGCTGGTCTGGTGTGGAAGAGATTACTAATGGGTCTGCATTAGTTAAAACCATTGAAGAGGCCCTGAGTTCCAAAGAGGAGGGTCCTATTTGGGTTGCTGGAACTATTGTGGCCATAAATTGCAGAAATAATGATTGGTATTACAAGGCCTGCAGAAGATGTCCTAAGAAAGTTGAAACACTAGTTGGTAATAGATACGAATGTGACAAATGCGGCCACACGCATGGAATTGCATCTATAAGCATTTTCCTCTTGCTATGGGATAGAGAAACAAGCCAATTATGTGGGAAACAAGCTGAAAAAATTTTGGAGGAAGATATAAATGTGAAAGCTGCTAATATCAGTGGCTATGATCAAGTGTTCACTGTGATGAAGATATGTGACGATGAAGAAGTTGTTGACAAAAACCTACCCAAGAATTTCGATGGGAATTCATTAGTGAATGTGACGGAGAATGGGTGTAGTAACTCACTTGATATGTTTGGGAACATTACTAATCTTAATACTGACACTGACCCTGATGCTCAATATACTATGGATGCTAGAGAAGATTCCATAACCAGTCTTAAGTGTAAAACCCCTGCTAAAAAAGTTACAAATGGCTTCAGATCTGGCTGTAGTAGTGCAAACCAGAATAAAAACGAGGGACAACTCTCAACAAATAAGTTTAGCTGA 1332 0.3964 MGKNYDYVSDVNVRKLCWNFKFNEKEVGNIEMILQDSKGHASIPKSIVKKWSGVFQVFQMTEVNHVMNPTFPLDAFVFKTIPESLTAKKIENSELFDMIGEVVGKHDPRELVTNKGKESKRLVVVLQDLEKNMINSTLFGEMVDEILPHLEDGRLESLIVVIQYFKAIRWNGKTSVQSHFEISKLHINAELKEVVGFRNILLKEAPSNASRISQMSSQSGWSGVEEITNGSALVKTIEEALSSKEEGPIWVAGTIVAINCRNNDWYYKACRRCPKKVETLVGNRYECDKCGHTHGIASISIFLLLWDRETSQLCGKQAEKILEEDINVKAANISGYDQVFTVMKICDDEEVVDKNLPKNFDGNSLVNVTENGCSNSLDMFGNITNLNTDTDPDAQYTMDAREDSITSLKCKTPAKKVTNGFRSGCSSANQNKNEGQLSTNKFS* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1305 443 Gene3D - 71 209 IPR012340 -
Amo20g1305 443 SUPERFAMILY Nucleic acid-binding proteins 91 201 IPR012340 -
Amo20g1305 443 SUPERFAMILY Nucleic acid-binding proteins 235 325 IPR012340 -
Amo20g1305 443 Gene3D - 216 347 IPR012340 -
Amo20g1305 443 MobiDBLite consensus disorder prediction 421 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1305 Amo-Chr20 27282968 27285725 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1305 13 290 Core DNA Replication Machinery Family AT2G06510 23.232 8.46e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1305 - - adu:107477039 487.263