Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1284 CAACTTCAACTACACTTCATCACAATCATCGCAATATATTTTTCTCCTCTGAAATCCACCACCCCATATACAATTTCCCTCTTAACACAGCGTTTCAAGAGTAACTACATTAACTCCATAAAGTGCAATGCATTCTTGGATAACATCAAAGAGTTATTGGTGGAGTTGGACTCCACACTAGGGAAGTTCCAGAATTTTGTCATGGATTTACTTAACTGCAAGCCTGGTCTTCTTGTTGGAGCCGTTGATGCATACTATATGGCTCCAATTCAAATGGTTCTGGATAGCTTATTTGGAAAGAGAAATCTCAAAAGGAGTGATTTTGTGATTGGAGATAAATTAGGAGAAGGATCATTTGAACAAGAGAGGATAAAGAAGAGTGGCAATAAGGGGAGGAATGTAATAAAAAAGTTGGATGCAAAATCTAAGGACAAAGTCATTCTTAAAAAGTTTTCTCCCCCAACACAAACACTTCGTCTCTTCTTCTTCCACCCTGTGACTTCTTCTTCATCTCCCCATCAATGGCGTAGCGTTAGGGTTAAGTTGTTATCGCTCTTCCCTTCCCTTCCTTCACCACAAACACGAGGTTCTGACGTTGTGATCGGACTCAAGATAGAGGAGAAGTTGGACATCATGTTTCATCATGGAGTGAATAAATGGATATCACAATTAATTGCAATTGCCACTGAACAAATGAAGGAGAAGAATGAAAGAGTCTTCAGAGCAGCTCCAGAAACATGTGCTAGGTTTTTTGGAAGTTTTGTTGCTGATAAAACCAATCACTTTTCACAAAAGGTGGAAAATGACTTGTTTGGAAGTTTGAGGTGCTCTTATTTATGTTTCTGTTTGATAAAGGGTTATGATGTCACAGGGTGGCTGTTCTCTTACCGACTACATGACGGATTGAAACTTTCCTTCAAACTTGGACTCTGTCATGTTTCGACAAGTCTTGCAAGGGATAGACTCGTTGAAAAGAGATGCCTTGATCTTACTTTGCTTGATAAGAAGATTCATGACACAGGCATTGTTCACTGGGATATAAAGCCTGCCAACTTGGTGGTTACTAAACACGAACAAATCAAATTCATTGATTTTGGTTCAGCTACTGACCTGCAAATCGGAAAGAATTATGTTTCCAATTTTACCCCTTTGGATCCTGACTATTGTCCCCCAGAATTGTATGTGCTACCTGAAGAAACAACTAGTCTTCATCCAGAGCCAATTGCAGCTTTTCTTTCACCAATATTGTGGCAGATACACATGAAAGGTGCTAAGATGAACCTCTATGATTTTGGAATCCTCAATGGGACTCCGGTAGAGGTTGGGACTGAGATTCCTCGGCGAGCAGACGCTTATCGGCCGCGGCTGCTTTGA 1374 0.4047 QLQLHFITIIAIYFSPLKSTTPYTISLLTQRFKSNYINSIKCNAFLDNIKELLVELDSTLGKFQNFVMDLLNCKPGLLVGAVDAYYMAPIQMVLDSLFGKRNLKRSDFVIGDKLGEGSFEQERIKKSGNKGRNVIKKLDAKSKDKVILKKFSPPTQTLRLFFFHPVTSSSSPHQWRSVRVKLLSLFPSLPSPQTRGSDVVIGLKIEEKLDIMFHHGVNKWISQLIAIATEQMKEKNERVFRAAPETCARFFGSFVADKTNHFSQKVENDLFGSLRCSYLCFCLIKGYDVTGWLFSYRLHDGLKLSFKLGLCHVSTSLARDRLVEKRCLDLTLLDKKIHDTGIVHWDIKPANLVVTKHEQIKFIDFGSATDLQIGKNYVSNFTPLDPDYCPPELYVLPEETTSLHPEPIAAFLSPILWQIHMKGAKMNLYDFGILNGTPVEVGTEIPRRADAYRPRLL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1284 457 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 335 419 IPR044803 GO:0004674|GO:0009579
Amo20g1284 457 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 236 260 - -
Amo20g1284 457 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 71 151 - -
Amo20g1284 457 ProSiteProfiles Protein kinase domain profile. 108 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g1284 457 Gene3D Transferase(Phosphotransferase) domain 1 326 435 - -
Amo20g1284 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 342 354 IPR008271 GO:0004672|GO:0006468
Amo20g1284 457 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 335 419 - -
Amo20g1284 457 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 236 260 IPR044803 GO:0004674|GO:0009579
Amo20g1284 457 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 71 151 IPR044803 GO:0004674|GO:0009579
Amo20g1284 457 Pfam Protein kinase domain 337 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g1284 457 SUPERFAMILY Protein kinase-like (PK-like) 337 395 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1284 Amo-Chr20 26931594 26938167 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Amo20g1284 Pkinase 4.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1284 - - adu:107485323 238.81