Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1225 ATGAATTGGAGAGTAGGAATTTTCAATCTTGCAGATTGTAGCTGCCCTTGCTGCTCAATGAAAGCTTTTGTTTATTATGGAATCGCGATTTTTCAGGAGATTGCTTTCTTCGATGTTACTCGAACGGGAGAAATCTTAAGTAGGTTGTCGGAAGATACACAGATCATAAAGAATGTCGCAACTACCAATGTTTCTGAGGCCATGAAGAACCTAGCAACAGCACTTACGGGTCTCAGCTTCATGTTTGCAACATCTTGGAAGTTAACATTGTTGGCTTTGGCTGTTGTGCCTGTAATTTCTGTTGCTGTCTGTAAATTTAGGCATTTCCTGCGTGAACTATCTCACAAAATTCAAACTGCAGCTGCAGTAGCATCTTCAATTGCTGAGCTTTTTGAAGGTTTTGCTTTGTCTCTTCAAGCTCAGCTTCAATGGCTTCATGCCTCAGTTGTTGCAGCTGAATCTTTAGCTCTGACCCTGCAAGCATCTTGCAATTTAAAAGATTCAAAAGAACTTTTTGAAAGGTTATTCCAATATTATTAA 540 0.3944 MNWRVGIFNLADCSCPCCSMKAFVYYGIAIFQEIAFFDVTRTGEILSRLSEDTQIIKNVATTNVSEAMKNLATALTGLSFMFATSWKLTLLALAVVPVISVAVCKFRHFLRELSHKIQTAAAVASSIAELFEGFALSLQAQLQWLHASVVAAESLALTLQASCNLKDSKELFERLFQYY* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1225 179 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 30 129 - -
Amo20g1225 179 Gene3D ABC transporter type 1, transmembrane domain 25 135 IPR036640 GO:0005524|GO:0016021
Amo20g1225 179 SUPERFAMILY ABC transporter transmembrane region 31 128 IPR036640 GO:0005524|GO:0016021
Amo20g1225 179 Pfam ABC transporter transmembrane region 31 129 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo20g1225 179 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 32 129 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo20g1225 179 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 30 129 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1225 Amo-Chr20 24768229 24771179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1225 25 129 Calmodulin-binding Proteins AT2G36910 30.189 2.54e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1225 - - aip:107621923 258.07