Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1214 ATGAATTTGATAATGCATCTAATATTCTATCTTCGTTCAATGTTGTGTAGAGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAAGCTGTCATAAGGAGGCTATCACGAAGATTAATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAATATATTGAAAGTTATATTGGTAAAAGAGGACTTGTCTTCCGATATTGATTTTGATGCAATCGCAAATATGACCGAGGGGTATTCTGGAAGTGATCTTAAGGAGCATGCTGCTGCTCTGGCAGAGGGTAGACCTACTCCAGCATTAAGTGAAAGTTCCGATATCAGGTCACTAAACATGGAAGACTTTAAACATGCTCATCAACAGGTATGTGCGAGTGTGTCCTCTGAATCCATAAATATGACCGAGCTTTCGCGATGGAATGATCTATACGGTGAAGGTGGTTCAAGAGTAAAGAAAGCACTTAGTTACTTCATGTGA 480 0.3979 MNLIMHLIFYLRSMLCRVLVLAATNRPFDLDEAVIRRLSRRLMVNLPDAPNRANILKVILVKEDLSSDIDFDAIANMTEGYSGSDLKEHAAALAEGRPTPALSESSDIRSLNMEDFKHAHQQVCASVSSESINMTELSRWNDLYGEGGSRVKKALSYFM* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1214 159 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 17 159 - -
Amo20g1214 159 Gene3D - 17 134 IPR027417 -
Amo20g1214 159 Gene3D - 47 123 - -
Amo20g1214 159 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN-RELATED 17 159 - -
Amo20g1214 159 Pfam AAA+ lid domain 68 117 IPR041569 -
Amo20g1214 159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 135 IPR027417 -
Amo20g1214 159 ProSitePatterns AAA-protein family signature. 18 37 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1214 Amo-Chr20 24327151 24328143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1214 18 86 Calmodulin-binding Proteins AT3G56690 38.356 2.93e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1214 - - adu:107480734 256.529