Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1212 ATGCCTTCTTCAGCAATGATACCTACCTGCATATCCTCGTCAAAGGATATGCAGGTCGACATCGAGAAGAACCAAAGCCATGTAAGATGTCAGTGGGTACTCAACCCTCCTGAGCCACCGAATCCTTGGCGCATGGTCACGGACTTAGCGGAAAAAAGTATCTTGCGTTGGCGCAAGAACTTTTCTACGCTGAGACATGAATCATGGGCCAGGGTCATGTTTTCAACTTTGCAGAGGATTTTTCCGATCCTTGTGTGGGGAAGAAGTTACACTGCCACTAAATTCAGGAAAGACTTGCTTGCTGGTCTCACTATTGCAAGTCTCTGTATTCCCCAGAGCATTGGGTACGCGACCTTAGCAAACCTTGATCCTCAATATGGCCTTTATACGAGTGTTGTGCCACCGCTGATCTATGCCGTAATGGGAACCGCTCAAGAGATAGCAATAGGGCCAGTGGCGGTGGTGTCGTTGCTCTTGTCTTCGATGGTTCAGAAATTAAGAGATCCTGTTTTTGATCCAATCGCTTACACCAAACTCATCTTGCTTGCCACTCTCTTTGCTGGTATTTTTCAGACCGCCTTTGGCCTTTTCAGGCTGGGGTTCCTTGTGGATTTCCTGTCACACGCAGCAATAGTTGGATTTGTGGGAGGAGCAGCCATTGTTATTGGTCTTCAACAGTTGAAGGGACTCTTAGGAGTTTCTCACTTTACTACCAAAACCGACATTATCTCTGTCATCAAAGCTGTTTGGCAAGCAATTCATAATCCCTGGAATCCTCGCAATTTCATACTAGGATGCTCATTCCTGGTCTTCATCCTATCTACTAGATTTCTGGGTAAAAAGAAGAAGAAGCTGTTCTGGTTGGCATCAATTTCCCCTCTCATATCAGTTGTAGTATCAACTTTGTTGGTTTTTGTGACACATGCTGATAAGAATGGAGTTAAAATTGTAAAACATGTCAAAGGAGGATTAAATCCAAGCTCCATTCATATGTTGGATTTCAATAATCCCTATGTTGGAGAAGTCGCCAAAATTGGACTAATCGTTGCTGTTGTTGCCCTCACTGAATCTGTTGCTGTTGGACGGTCTTTCGCATCCATCAAAGGGTACCAACTTAATGGGAACAAGGAAATGGTGTCAATTGGCATCACCAACATCATAGGATCTTTCACCTCTTGCTATGTTGCTACTGGTTCATTCTCCCGAACGGCGGTGAATTATGCAGCTGGATGTGAAACATTGGTGTCAAACATAGTGATGGGAATGACAGTGTTGATATCGTTGCAGTTCATGACAAAGCTTTTGTATTACACACCAACTGCCATTCTTGCTTCGGTCATCCTTTCTGCACTGCCAGGCCTCATAGATATCAATGAAGCTCTCAGAATATGGAAGCTTGATAAGTTTGACTTTCTTGCTTGTCTTAGTGCCTTCTTTGGTGTACTCTTTGCATCTGTGGAGATTGGTCTTCTTGTTGCGGTGGCAGTATCGTTTTCAAAGATAATTGTGATATCAATACGACCAGGGACAGAAACTCTAGGAAAATTACCGGGAACCGATTTGTTCGGTGATGTTAATCAGTATCCAATGGCTGTTAAGATCCCTGGCCTTCTCATTATACGTCTTAAGTCTGCCTTGCTTTGCTTTGCAAATGCCACTTTCGTTAAAGAAAGGATCATGAAATGGGTCAGTGAGGAAGAAGAATCGATGGATGACAAGGGAAATGCAATAAGCCAAATTCAATTCGTAATCCTTGACATGTCCAATTTGGTGAACATTGACACATCTGGAATTGCTGCTCTTGAGGAACTGCACAAGAGTTTGTCCTCACATAGGAAGCAGTTAGCCATTGCGAACCCAAGGTGGCAAGTGATTCACAAGCTAAAGGTATCAAACTTTGTCAACAAAATCAATGGCAGGGTCTTTCTCACTGTTGAAGAAGCTGTTAGCTCCAAGATCCAGTGCTGA 1968 0.436 MPSSAMIPTCISSSKDMQVDIEKNQSHVRCQWVLNPPEPPNPWRMVTDLAEKSILRWRKNFSTLRHESWARVMFSTLQRIFPILVWGRSYTATKFRKDLLAGLTIASLCIPQSIGYATLANLDPQYGLYTSVVPPLIYAVMGTAQEIAIGPVAVVSLLLSSMVQKLRDPVFDPIAYTKLILLATLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVGGAAIVIGLQQLKGLLGVSHFTTKTDIISVIKAVWQAIHNPWNPRNFILGCSFLVFILSTRFLGKKKKKLFWLASISPLISVVVSTLLVFVTHADKNGVKIVKHVKGGLNPSSIHMLDFNNPYVGEVAKIGLIVAVVALTESVAVGRSFASIKGYQLNGNKEMVSIGITNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMGMTVLISLQFMTKLLYYTPTAILASVILSALPGLIDINEALRIWKLDKFDFLACLSAFFGVLFASVEIGLLVAVAVSFSKIIVISIRPGTETLGKLPGTDLFGDVNQYPMAVKIPGLLIIRLKSALLCFANATFVKERIMKWVSEEEESMDDKGNAISQIQFVILDMSNLVNIDTSGIAALEELHKSLSSHRKQLAIANPRWQVIHKLKVSNFVNKINGRVFLTVEEAVSSKIQC* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1212 655 Pfam STAS domain 528 648 IPR002645 -
Amo20g1212 655 ProSiteProfiles STAS domain profile. 547 652 IPR002645 -
Amo20g1212 655 Gene3D STAS domain 507 653 IPR036513 -
Amo20g1212 655 TIGRFAM sulP: sulfate permease 82 645 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo20g1212 655 PANTHER SULFATE TRANSPORTER 62 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo20g1212 655 Pfam Sulfate permease family 95 475 IPR011547 GO:0016021
Amo20g1212 655 PANTHER SULFATE TRANSPORTER 2.1 62 651 - -
Amo20g1212 655 SUPERFAMILY SpoIIaa-like 532 650 IPR036513 -
Amo20g1212 655 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1212 Amo-Chr20 24213697 24246841 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1212 3 651 Inorganic Solute Cotransporters AT5G10180 65.948 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1212 K17469 - gmx:100817831 1014.99