Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1210 ATGGCTTCTTCAGCAATGATACCTACCTGCATATCCTCGTCAAAGGATATGCAGGTCGACATTGAGAAGAACCAAAGCCATGTAAGGTGTCAGTGGGTACTCAACCCTCCTGAGCCACCGAGTCCTTGGCGCATGATCACGGACTCAGTGGAAAAAAGTATCTTGCGTTGGCGCAAGAACTTTTCTACGCTGGGACATGAATCATGGGCCAGGGTCATGTTTTCAACTTTGCAGAGGATTTTTCCGATCCTTGTGTGGGGAAGAAGTTACACTGCCACTAAATTCAGGAAAGACTTGCTTGCTGGTCTCACTATTGCGAGTCTCTGTATTCCCCAGAGCATTGGGTACGCGACCTTAGCAAACCTTGATCCTCAATATGGCCTTTATACAAGTGTTGTGCCACCGCTGATCTATGCCGTAATGGGAACCTCTCAAGAGATAGCAATGGGGCCAGTGGCGGTGGTGTCGTTGCTCTTGTCTTCGATGGTTCAGAAATTAAGAGATCCTGTTTTTGATCCAATCGCTTACACCAAACTCGTCTTGCTTGCCACTCTCTTTGCTGGTATTTTTCAGACCGCCTTTGGCCTTTTCAGGCTGGGGTTCCTTGTGGATTTCCTGTCACACGCAGCAATAGTTGGATTTGTGGGAGGAGCAGCCATTGTTATTGGCCTTCAACAGTTGAAGGGCCTCTTAGGAGTTTCTCACTTTACTACCAAAACCGACATTATCTCTGTCATCAAAGCTGTTTGGCAAGCAACTCATCATCCCTGGAATCCTCGCAATTTCATACTAGGATGCTCATTCCTGGTCTTCATCCTATCTACTAGATTTCTGGGTAAAAAGAAGAAGAAGCTGTTCTGGTTGGCATCAATTTCCCCTCTCATATCAGTTGTAGTATCAACTTTACTGGTTTTTGTGACACATGCTGATAAGAATGGAGTTAAAATTGTAAAACATGTCAAAGGGGGATTAAATCCAAGCTCCATTCATATGTTGGATTTCAATAATCCATATGTTGGAGAAGTCGCCAAAATTGGACTAATCCTTGCTGTTGTTGCCCTCACTGAATCTGTTGCTGTTGGACGGTCTTTCGCATCCATCAAAGGGTACCAACTTAATGGGAACAAGGAAATGGTGTCAATTGGAATCACCAACATCATAGGATCTTTCACCTCTTGCTATGTTGCTACTGGTAGGAACAATTTTTGTTATTTCCTCCAAAAACTACACCTAATTCTCAACTAA 1245 0.4418 MASSAMIPTCISSSKDMQVDIEKNQSHVRCQWVLNPPEPPSPWRMITDSVEKSILRWRKNFSTLGHESWARVMFSTLQRIFPILVWGRSYTATKFRKDLLAGLTIASLCIPQSIGYATLANLDPQYGLYTSVVPPLIYAVMGTSQEIAMGPVAVVSLLLSSMVQKLRDPVFDPIAYTKLVLLATLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVGGAAIVIGLQQLKGLLGVSHFTTKTDIISVIKAVWQATHHPWNPRNFILGCSFLVFILSTRFLGKKKKKLFWLASISPLISVVVSTLLVFVTHADKNGVKIVKHVKGGLNPSSIHMLDFNNPYVGEVAKIGLILAVVALTESVAVGRSFASIKGYQLNGNKEMVSIGITNIIGSFTSCYVATGRNNFCYFLQKLHLILN* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1210 414 PANTHER SULFATE TRANSPORTER 28 399 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo20g1210 414 PANTHER SULFATE TRANSPORTER 2.2 28 399 IPR030315 GO:0008272|GO:0015116
Amo20g1210 414 TIGRFAM sulP: sulfate permease 82 398 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo20g1210 414 Pfam Sulfate permease family 95 398 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1210 Amo-Chr20 24098008 24104202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1210 3 398 Inorganic Solute Cotransporters AT5G10180 65.657 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1210 K17469 - gmx:100817831 601.282