Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1197 ATGCAGACACCAAAGAAAACACAAGAAAATTGGACTCTAGAATATGCAAGGCTCAAAGCAAGGGTGGAAGTCTTAGAGAGAAATCAAAGGAATTTTATGGGACAAGATCTGCAATGCTTAAGTCTAAAAGAGCTTCAGAATTTAGAACAGCAGCTTGATTCTGCCCTCAAACAAAACCAACTCATATATGAGGATATCTCAGTGCTTCAGGAAAAAGTTAGTCTCAGTTTGTGTAAACTTTACATTTCGAAAATATCTTATAAGCATAATAAATTACTAAAAAGTTATGATAAAATAAAAGTACTCTTAAGAGAGAATAGGAAAGCACAAAAAGGTCATCATGAGTCCTACAAAACATATATAAATGAACAAAAACACAAGCAATTGAACAAGAAAACAATCAAAATACTAAGTCTAAACTATCAACAAAATTTCTAG 438 0.3174 MQTPKKTQENWTLEYARLKARVEVLERNQRNFMGQDLQCLSLKELQNLEQQLDSALKQNQLIYEDISVLQEKVSLSLCKLYISKISYKHNKLLKSYDKIKVLLRENRKAQKGHHESYKTYINEQKHKQLNKKTIKILSLNYQQNF* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1197 145 PANTHER SERUM RESPONSE FACTOR HOMOLOG 7 127 - -
Amo20g1197 145 Pfam K-box region 5 73 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo20g1197 145 Coils Coil 45 65 - -
Amo20g1197 145 ProSiteProfiles K-box domain profile. 8 105 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo20g1197 145 PANTHER TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A 7 127 - -
Amo20g1197 145 Coils Coil 8 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1197 Amo-Chr20 23548607 23549404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1197 9 72 MADS-box Gene Family AT5G60910 65.217 2.27e-24 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1197 K09264 K09260 psom:113298120 98.9821