Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1187 ATGGCCAGCAACGGAGAGCAGAACCAAACTTCTGAAGCTGGAAGGCACCAAGAAGTTGGTCACAAGAGCCTTCTCCAGAGTGATGCTCTATACCAGTACATTCTGGAAACCAGCGTGTACCCAAGAGAACATGAAGCCATGAAAGAATTGAGAGAATTGACAGCAAAGCACCCATGGAACATCATGACAACCTCTGCAGATGAAGGACAATTTTTGAACATGCTCCTTAAGCTCATCAATGCCAAGAATACCATGGAAATCGGTGTCTACACCGGTTACTCGCTTCTTGCCACTGCCCTTGCTCTTCCTAAAGATGGAAAGATCTTGGCCATGGATATTAACAAGGAGAACTACGAATTGGGTCTGCCAGTAATTAAAAAAGCCGGTGTTGACCACAAAATTACCTTCAAAGAAGGACCAGCTCTCCCTGTTCTCGACGAATTGGTTAAAGATGAGAAGAACCATGGAAGCTACGACTTCATTTTCGTGGACGCAGACAAGGACAACTACCTGAACTACCATAAGAGGCTCATCGATTTGGTGAAGGTAGGTGGTGTGATCGGCTACGACAACACCCTATGGAATGGGTCTGTGGTCGCACCTGCCGATACACCCATGAGGAAGTACGTTAGGTACTACAGAGATTTTGTGTTGGAGCTTAACAAGGCCTTGGCTGTGGACCCCAGAATTGAGATCTGCATGCTCCCGGTTGGTGATGGAATCACTCTCTGCCGTCGGATCAGCTGA 747 0.4726 MASNGEQNQTSEAGRHQEVGHKSLLQSDALYQYILETSVYPREHEAMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPKDGKILAMDINKENYELGLPVIKKAGVDHKITFKEGPALPVLDELVKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPADTPMRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITLCRRIS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1187 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 246 IPR029063 -
Amo20g1187 248 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 4 248 - -
Amo20g1187 248 PANTHER O-METHYLTRANSFERASE-RELATED 4 248 - -
Amo20g1187 248 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 247 IPR002935 GO:0008171
Amo20g1187 248 CDD AdoMet_MTases 86 187 - -
Amo20g1187 248 Pfam O-methyltransferase 36 247 IPR002935 GO:0008171
Amo20g1187 248 Gene3D Vaccinia Virus protein VP39 22 248 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1187 Amo-Chr20 23347125 23355707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1187 4 248 Monolignol Biosynthesis Gene Families AT4G34050 87.755 1.65e-166 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1187 K00588 - gmx:100811247 468.388