Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1173 ATGAACAACATTAATCATAAACCGATATCGACGTCAACCAATTATGAATCGGCAATTCCAAATCTGAAGGATGGGCTTCTGAATCAGACAACCATAGATCCTCAATCGGCTCAGGTACCAAGTCATGTTAGCATTGACGATGTCTTGAAGATGGAATTCTTTACCCCTGGGGAAGCAAGAGAATTCTACATGAGTTATAGTAGGCTAAAAGTTTTTGCAATAAGGAAGAGTAAGAGAGTAAAAAATGCCAAAGGAGAGATCATTATATACACTTTTGTTTGCAACAGACAAGGGTTGATGCACAAGAAGTGGTTAGAGAAGTTGGATAGAAAAAGAGAGCAGAAGCCTGTAACTCGTTGCGGGTGTGTGGTAGAGATGAGGATCAAGAGGAATCATACTAATGGAAAATGGTTTGTTTCACAGTTTGTAGATGATCATAACCACACCCTTCTCTCAGAAAGGTTGATTGGATATTTGCCTTCACACAGGAATACGTCTGATGTAGAAATTGCTCAAATGAATAGCTTGAGGCAAGTTAGAATAAGTATCCCAAAGATATACCAGTCATTTGCGATGCAAGTTGGGGGCTTTAACTTAGTAAGGTTTACTAAGCAAGATATGCACAATGAGGAGGAAGAACTTGACTTTCGATCTTTTATGGTACCCTAG 669 0.3916 MNNINHKPISTSTNYESAIPNLKDGLLNQTTIDPQSAQVPSHVSIDDVLKMEFFTPGEAREFYMSYSRLKVFAIRKSKRVKNAKGEIIIYTFVCNRQGLMHKKWLEKLDRKREQKPVTRCGCVVEMRIKRNHTNGKWFVSQFVDDHNHTLLSERLIGYLPSHRNTSDVEIAQMNSLRQVRISIPKIYQSFAMQVGGFNLVRFTKQDMHNEEEELDFRSFMVP* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1173 222 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 28 190 - -
Amo20g1173 222 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 28 190 - -
Amo20g1173 222 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1173 Amo-Chr20 23030918 23032525 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g1173 FAR1 1.9e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1173 - - adu:107458091 334.724