Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1139 ATGATAGCAAAAGAAATAAATAAGCCGCATTTTTCTTTTTTTTTTCTATGGATGTTGGAGGCGTGTCTCTATCATCCTTCATCTCTTGGTACGAACCAAATGCTAATCAAARCTCTTCATCTTTATGACTGCCTGAGAGCCAATAAATCAACTTCAGCATGGGGTATAGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCAACACAGCCATGAGTATTGATCCAGAGTGGAAAATGATACGACCTGATCTCGGAAGGATAGAGAAGTGGGTATTGCRCAATGCATTTGATGACGAAACAAATCCATATTTACCAAAGCACATTTTGTACAGGCAGAAGGAACAGTTMAGYGAKGGTGTAGGGTACAGCTGGATTGATGGCTTGAAGGAGCATGCTAACCAACAAAGTTCCATTGATGCCATCCCATGGTTTCTGCTCTTTTTCACTTTACAAACTGACAGGTCACAGATGGAATGCTGTTGCATGCTAACTATGTACCCTGAAAACACTCACACAACAAAAGAAGCATACCTCTACAGGACAATTTTTGAGAAGCACTTTCCAAAGAATGCCGCAAGATCAACCGTTCCAGGAGGTCCTAGTGTAGCGTGCAGCACCGCAAAAGCTGTGGAATGGGATGCCGAATGGTCAAAGAATCCTGACCCTTCTGGCCGTGCTGCTCTTGGTGTTCATGCAGCGGCATATGAGGCTGCAGCAGATGCAAAAACAGCCTAG 738 0.4309 MIAKEINKPHFSFFFLWMLEACLYHPSSLGTNQMLIKXLHLYDCLRANKSTSAWGIEARVPFLDKEFINTAMSIDPEWKMIRPDLGRIEKWVLXNAFDDETNPYLPKHILYRQKEQXSXGVGYSWIDGLKEHANQQSSIDAIPWFLLFFTLQTDRSQMECCCMLTMYPENTHTTKEAYLYRTIFEKHFPKNAARSTVPGGPSVACSTAKAVEWDAEWSKNPDPSGRAALGVHAAAYEAAADAKTA* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1139 245 PANTHER ASPARAGINE SYNTHETASE 36 239 - -
Amo20g1139 245 CDD Asn_Synthase_B_C 35 120 IPR001962 GO:0004066|GO:0006529
Amo20g1139 245 Pfam Asparagine synthase 35 193 IPR001962 GO:0004066|GO:0006529
Amo20g1139 245 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 36 239 - -
Amo20g1139 245 Gene3D HUPs 23 196 IPR014729 -
Amo20g1139 245 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 33 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1139 Amo-Chr20 21770844 21775630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1139 K01953 - jre:109001576 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1139 20 21770844 21775630 Amo10g0700 10 8932498 8938365 hybridization