Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1135 GATGCCCTGAATTCTTTGAAGAACAGATTGACAGATCCTGCTGGTGTTCTTCAAAGCTGGGATTCCACTCTTGTCAATCCATGTACATGGTTTCATATTAGAGAGATYCGCCAGAAATATGATATGGTGACCTACCTGTTGGAGTATATTTACTATCCTGACCAAATTGCACTTCATTTCTTTTGTGAGGAGGAATTGCATAATAATCTAGTCAGACTAGATATGCTATTTCAAAAGGCAGTGGAGTCTGGAATTGAGATACAGTTTAACAGATCGAAGTCTCTCAACATCCTTCCCAAAATTAGACAAAAGATCAGAATGTATCCTGTGTTGCTGCAGGCTAATATTACCCAATCTCTTGTTTTAGATAGAGTCAAGGGAAGAGAACTAAACTGGGAGAAGAGATATGACACTATCATTGGGACAGCTGAAGGATTGGTTTACCTGCATGAGAATTCAAAAACTAGGATAATTCAAAGAGATATAAAAGCCAGCAACATCTTATTGGATGCTAAACTTTGCGCCAAAATTATATGTGTGGTTAGCTATAAGAGCAGATTGCTTTATACACCTTTAGTGTATGCTACAGTACAAATTTTACAGGCTAATTCTGTTCGCAAGTGTCCTGAATGTAAACAGCCACTACCCGAAAGCTATTCGCCTCCGGCAGATGAACCTTGGACGACTGGGATCTTTGGATGCACTGAAGATAGGGAAAGCAAGAAGTGTAGCCCTTTTCCAATTGCATTAAGAGATATAAAGCAACACGACATTACTCAAAGCATCCGCGGACTA 795 0.395 DALNSLKNRLTDPAGVLQSWDSTLVNPCTWFHIREIRQKYDMVTYLLEYIYYPDQIALHFFCEEELHNNLVRLDMLFQKAVESGIEIQFNRSKSLNILPKIRQKIRMYPVLLQANITQSLVLDRVKGRELNWEKRYDTIIGTAEGLVYLHENSKTRIIQRDIKASNILLDAKLCAKIICVVSYKSRLLYTPLVYATVQILQANSVRKCPECKQPLPESYSPPADEPWTTGIFGCTEDRESKKCSPFPIALRDIKQHDITQSIRGL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1135 265 Gene3D Transferase(Phosphotransferase) domain 1 118 185 - -
Amo20g1135 265 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 1 34 - -
Amo20g1135 265 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 104 173 - -
Amo20g1135 265 ProSiteProfiles Protein kinase domain profile. 1 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g1135 265 SUPERFAMILY Protein kinase-like (PK-like) 124 178 IPR011009 -
Amo20g1135 265 Pfam Leucine rich repeat N-terminal domain 1 33 IPR013210 -
Amo20g1135 265 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1-RELATED 1 34 - -
Amo20g1135 265 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1-RELATED 104 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1135 Amo-Chr20 21722981 21726599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1135 112 177 Receptor kinase-like Gene Family AT1G70520 59.091 2.43e-18 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo20g1135 LRRNT_2 8.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1135 - - adu:107484300 121.709