Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1130 ATGCCGCATACACCGCAGGTGCCACCACCAATTAGGCCACCAACCACAAAAATAAAGAGAACAAAGAGATCCACCAAGAGGCCTCCTCCATCACAAGTTCAGATCCCTGTGTCTCAGACTCCAACTTTGAACACTCATCAGCAGCCATCCAATGCATTTGTTAGGCCACCCACCGTGTCCCCACATACAATGCAAGGAGCCAGTGCAGGCACAACTTCCAGCAAATCAATCTTTCATGCAGATGTGATGGCTCCAGGCGTTGGCATTTTAGTTGCCATGATTCCCAAAAATGATGAACCAGGAAGTATTCCAATAGGGAAAAAACCCTCCTTATTTGGCATAATGTCAGGTACATCTATGGCTTGCCCACATGTTACAGGTGCTGCTGCTTTCATTAAATCTGTTCATGAAATGTGGATTCCTTCAATGATCAAATCAGCATTGATGACAATAGTTTCTAGGAGAGGCTTTGAGGTTTTGAACCATTTGGGTGGTGGAACCATGGAATACGAAGCTCGCATGTATCGATTAAATGGCATTGCGCACGTGGCTGGATACATCGACCAAGAGAATATGTCGTTACACGACCGGATTATACCGTATCTGGAGACCGCGGACTTGTATCACTTGGCTAGGCTGAACAGTCAGTGGTTCTGGGTTGATGAGCATCTACTTAACGCATTCGTTGAGAGCCTTGAACATCATGAATCATGCCACCACCGGTATCCACCTCAAATGCCTGTTGCCAGACCCCAGGATTCTCCAACGGTACAGAAGCAACTGCCTCCGTTTGATCTAAATCAGCCGCAAAGGAAGGGATGCGACCTGCGGAACAGATGGTCCGGCCGCAGGCATCAAACTAGACACACCGCCCGCGGTAGTCGAGCTATAAACTGGAGCTGA 903 0.4806 MPHTPQVPPPIRPPTTKIKRTKRSTKRPPPSQVQIPVSQTPTLNTHQQPSNAFVRPPTVSPHTMQGASAGTTSSKSIFHADVMAPGVGILVAMIPKNDEPGSIPIGKKPSLFGIMSGTSMACPHVTGAAAFIKSVHEMWIPSMIKSALMTIVSRRGFEVLNHLGGGTMEYEARMYRLNGIAHVAGYIDQENMSLHDRIIPYLETADLYHLARLNSQWFWVDEHLLNAFVESLEHHESCHHRYPPQMPVARPQDSPTVQKQLPPFDLNQPQRKGCDLRNRWSGRRHQTRHTARGSRAINWS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1130 300 Pfam Subtilase family 70 152 IPR000209 GO:0006508|GO:0008236
Amo20g1130 300 MobiDBLite consensus disorder prediction 1 73 - -
Amo20g1130 300 MobiDBLite consensus disorder prediction 27 73 - -
Amo20g1130 300 MobiDBLite consensus disorder prediction 1 15 - -
Amo20g1130 300 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 57 155 IPR045051 -
Amo20g1130 300 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.4 57 155 - -
Amo20g1130 300 Gene3D Peptidase S8/S53 domain 59 150 IPR036852 GO:0004252|GO:0006508
Amo20g1130 300 MobiDBLite consensus disorder prediction 239 300 - -
Amo20g1130 300 SUPERFAMILY Subtilisin-like 31 154 IPR036852 GO:0004252|GO:0006508
Amo20g1130 300 ProSitePatterns Serine proteases, subtilase family, serine active site. 117 127 IPR023828 -
Amo20g1130 300 MobiDBLite consensus disorder prediction 251 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1130 Amo-Chr20 21627702 21630568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1130 55 150 Subtilisin-like Serine Gene Family AT1G04110 43.750 8.16e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1130 K25898 - aip:107621931 238.039