Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1101 ATGATTCTCACTCGTCACCACCTTCATCACCTCTTCGCAGATTCAACCCTCAACTCTTCACTCAGAAACTGCACGCCAATTCCGAACCCTTCCACTCGCTTCCGAGTCACGTACCTCAACTCGTTCGCAATTCACAAAATCGCTTCGGTTTCGACCCGACCCGCGGGTCAGTTTAGCATCAGAGCCCAAGAATCTGATGACGCGGTTTCAAAACGCGTTCTTGGCGACTTCGATTTGGACTCGGCACTCTCCGTGCTGGAATTCGCGTGCCTTCTTTCGTCGGCGGTTGCGTGGGTTGGTTTTGCTGTGATTGCTGGTTCGGCGAAGCAGGGGTTCTTGGTGGCGATTGGGGAGACTAGGGTTAGGGTTGTGGTGGCTGTGTGTGGGGTACTCATGATGGTTGGTGGGATTGCGATTGGAGCGTGGATTCGGAGGCGGCAATGGAATCGAGTTTGTGGCGGAACGGGAAAGGTGAATTTTGTTGGGAGGATTGAGAAATTGGAGGAGGAATTGAGGAATTCTGCCACTGTTATTAGGGTTTTGTCGAGGCATATAGAGAAATTGGGGACAAGGTTTAGGGTCACTCGCCAAAATTTGAAGGATCCCATAGCTGAGGCTGCAACTTTGGCACAGACGAATTCTGAGGCTACAAGAGCACTAGCAGTGCAATCAGATATGTTGGAGAAGGAACTTCGCGAAATTCAAAATGTTTTACTAGCAATGCAGGAACAACAGCAAAAACAACTTGATCTGATTCTTGCAATTGGGAAGACTACTAAGCTGTGGGAAATCAAACGGGAAACTAGTGAAGAACATGAAACTACATTAGATACACCTAACTTGGCTGAGGGCGAGGTAAAGCAGAAGGAAGTTCACCAAATTTGA 885 0.4859 MILTRHHLHHLFADSTLNSSLRNCTPIPNPSTRFRVTYLNSFAIHKIASVSTRPAGQFSIRAQESDDAVSKRVLGDFDLDSALSVLEFACLLSSAVAWVGFAVIAGSAKQGFLVAIGETRVRVVVAVCGVLMMVGGIAIGAWIRRRQWNRVCGGTGKVNFVGRIEKLEEELRNSATVIRVLSRHIEKLGTRFRVTRQNLKDPIAEAATLAQTNSEATRALAVQSDMLEKELREIQNVLLAMQEQQQKQLDLILAIGKTTKLWEIKRETSEEHETTLDTPNLAEGEVKQKEVHQI* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1101 294 Coils Coil 224 247 - -
Amo20g1101 294 PANTHER TRANSMEMBRANE PROTEIN 10 293 - -
Amo20g1101 294 Coils Coil 164 184 - -
Amo20g1101 294 MobiDBLite consensus disorder prediction 266 294 - -
Amo20g1101 294 PANTHER TRANSMEMBRANE PROTEIN 10 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1101 Amo-Chr20 20488240 20490624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1101 12 263 Eukaryotic Initiation Factors Gene Family AT5G65250 44.061 1.72e-59 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1101 - - gmx:100790782 260.766