Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1100 ATGGCTAATCGAAAGAGGGAGCATAAGATTATGACTCGTTGTGGTTGTCTTGCCAAGATGAGGATAAAACGAAAAAATGGGAGTTGCAAATGGTATATGTCTCAGTTTATGGATGAGCATAATCATGAACTTACATCTCGCAAGATATCTGATGTAGAGATTGCACAAATGACTAGCATGAGGGAGGTTGGTATCAGCATTCCCAAAATATATGAATCTTTTGCGGCACAAGTTCGGAGTTTTAACCTTGTGACATTCACAAAGCAGGACATGTATAATGAGGTGCGGCGACAAAGAGGAAAGCAAAATTGA 312 0.3974 MANRKREHKIMTRCGCLAKMRIKRKNGSCKWYMSQFMDEHNHELTSRKISDVEIAQMTSMREVGISIPKIYESFAAQVRSFNLVTFTKQDMYNEVRRQRGKQN* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1100 103 Pfam FAR1 DNA-binding domain 3 45 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1100 Amo-Chr20 20464920 20465261 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g1100 FAR1 3.3e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1100 - - adu:107478815 165.622