Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1047 ATGGGAGTTTTCACTTTCGTGCTCCGCAAATCCGGCGGAGAATGGACGGCGAAGCAGCACAACGGCGACATCGAGGAGTCGTCTTCCGACACCTTCGACATCCAACGAAAGCTCGTTAAGGCCGTCTGCGCAGTCGATTCATCCGGCGCCGTTCAATCCTCTTTCTCCATAGTTACCCCTTCCTCCGCCGTTTTCCAGGTGGTTGTGGGTGGTGCGGTGTTTGTTGGAGGTGGTGCAGCGGCTGCAGCTGCTCCCGCAGGAGGAGCTGCCCCAGCTGCTGAGGCCGCCCCGGCTGCAGCGAAGAAGGAAGAGAAGGTTGAGGAAGAAGACGATGAAGATTTTGGAATGTCACTTTTTGATTAG 363 0.5675 MGVFTFVLRKSGGEWTAKQHNGDIEESSSDTFDIQRKLVKAVCAVDSSGAVQSSFSIVTPSSAVFQVVVGGAVFVGGGAAAAAAPAGGAAPAAEAAPAAAKKEEKVEEEDDEDFGMSLFD* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1047 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 120 IPR044252 GO:0003735|GO:0005840
Amo20g1047 120 MobiDBLite consensus disorder prediction 106 120 - -
Amo20g1047 120 MobiDBLite consensus disorder prediction 92 120 - -
Amo20g1047 120 Pfam 60s Acidic ribosomal protein 72 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1047 Amo-Chr20 18514513 18516360 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1047 1 68 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 64.706 6.58e-28 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1047 K02942 - gmx:100804776 108.612