Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1030 ATGTTTGTCGAAATTGGGGGATGTGGAACCAAGGTGGTTGGGGTAGCTATCGGACCAGTGCATTCACAAGTAGAAGAATGTGACGGCGATGAAGAGAGAGTCGATGATCTTCAATGCAAGGGAATTTCTCAGCAGACCCAAGTTCATTTTGGATCCACTATTGATTGCCCTCCGCAGGCTCCATTAATTGTTGTGATGATCTACGATAATGAAACTTACGAATTTGATAAAAGCATGGACATGGATTTTGAAGTTGACGATTTCTTTGATGATAACTTCTATGAGAACTGGGATGGCAGGTCAATTGATGGTATTGCTGACCTTGATAGTCTTAACTTGAAGTCATTAACGGTGGATGAGATTAAGCTGCTACATTTCCCAGATCTTAATGTCGCCTTCTCTTTCTACAATTTTTATGCCAAAATGAACAGGATTTCTGCAAGGAGGAGCAAGTTGAGGCGCAATGTTAACGGTGATGTCACACAACAGTCATTTGTCTACTTCAGACAGGGATTTAGAGAGATGAAATCCTATGACGAGAGCAGTCAACGTAAACGTGAGCCAAAACCGGAGACTAGATGTGGATGCTAG 591 0.4213 MFVEIGGCGTKVVGVAIGPVHSQVEECDGDEERVDDLQCKGISQQTQVHFGSTIDCPPQAPLIVVMIYDNETYEFDKSMDMDFEVDDFFDDNFYENWDGRSIDGIADLDSLNLKSLTVDEIKLLHFPDLNVAFSFYNFYAKMNRISARRSKLRRNVNGDVTQQSFVYFRQGFREMKSYDESSQRKREPKPETRCGC* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1030 196 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 118 196 - -
Amo20g1030 196 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 118 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1030 Amo-Chr20 18248268 18250595 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g1030 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1030 - - adu:107496430 211.846