Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0995 ATGGCTTCTCTCTTACCTTGTGCGCCGCCCAACATAGCTTCTACTCCGTTCGGGAACCGGACTGGGTTCCCTCTGCTGAACCGGTCTCACTCCTACGCTATTCCCGCTTCGACCAGGAGCTTCCTCCGCGGGTCGCTTTCGGTGGCCCGGTTCGGGTTCAAACCCGGGTTCTTGCCGGAGCCCGACGCCGCCGGAGAGGTGTTAAGGGAGCTGTTCGATAGGGCGGAAGGGTTCCTCTACACGATTGCGGATGCCGCCGTCTCGAATTCCGACACAGCGGCGACGGCGACAACCACCGCCAAACAGAACAACGATTGGCTCTCGGGGATCACCAATTACATGGAAACTGTGCTCAAGGTACTCAAAGATGGACTTTCTACTTTGCATGCGCCATATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTCGTAAAAGCCGCCACCTTTCCGTTGACAAAGAAACAGGTAGAATCTGCCATGGCTATGCGATCACTGCAACCTCAAATAAAAGCTATCCAGCAACGTTATGCTGGTGATCAGGAGAGAATTCAACTTGAAACTGCTCGGTTGTATAAATTGGCCGGCATTAATCCTCTAGCAGGATGCTTGCCTACACTTGCAACAATACCAGTCTGGATTGGCCTATATCGAGCCCTTTCAAATGTGGCAGATGAGGGACTCCTTACAGAAGGTTTCTTCTGGATACCTTCTCTTGCTGGTCCAACAACGGTTGCTGCTCGTCAAAATGGAAGTGGTATCTCTTGGCTTTTTCCATTTGTGGATGGTCACCCTCCCCTTGGATGGTCAGACACATTGGCTTACCTTGTCTTGCCCGTGTTGCTCGTAGTCAGTCAGTACATCTCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAGAGTTCTCAAGCCATCACCAAGCTCCTTCCATTAATGATTGGTTATTTTGCTCTTTCAGTTCCTTCTGGACTAAGCCTTTATTGGTTAACAAATAATATATTGAGCACTGCTCAACAAGTATGGCTTCAAAAATTAGGGGGTGCAAAAAATCCTGTAGTTCAAATTCAAGATGATATTATGAAGGATGACCAAATGAAGATTCCGAAGTCGGTACCTAAAGTAAATTCCACGAAAACAGAAGCTAGACAAGATGAGAAATCAACATCAGGGGGGCCACAACCTGGTGAAAGATTTAGGCAACTAAAAGAGCAAGAGGCAAGGAGAAGACAACAAAGAGAAGAAGAAAAAGGGAAAGCCACTGAAGCAGCATCTAAAGCAACTAAAGTATACGAGACTAATGAGATAACAGTTGAAAAGGGAAATCAAGATGGGGGTGATAATGTTGAAAATTCTCAGCATGTTAACGCTGATGCTGATCCATCCACATCTCAAGTCACTGTAAATGGTAATCCACTAAGCAAAGACTTGGAAGAAAATCAGAATTCCACATATACACCTCAGAGGGAAAGTAATGAAGGTTCTCCTTTCAACAATGGAGTAAATGAGAAAAGTGATGAGGAACCAAGGGAAGCATTCACAACTACAGCTACCACCAAGAAGCAACATCCTGAAGAAGAATCGGATCACCTGGCGAAGGATTGA 1614 0.4616 MASLLPCAPPNIASTPFGNRTGFPLLNRSHSYAIPASTRSFLRGSLSVARFGFKPGFLPEPDAAGEVLRELFDRAEGFLYTIADAAVSNSDTAATATTTAKQNNDWLSGITNYMETVLKVLKDGLSTLHAPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPNDPNMKSSQAITKLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVVQIQDDIMKDDQMKIPKSVPKVNSTKTEARQDEKSTSGGPQPGERFRQLKEQEARRRQQREEEKGKATEAASKATKVYETNEITVEKGNQDGGDNVENSQHVNADADPSTSQVTVNGNPLSKDLEENQNSTYTPQRESNEGSPFNNGVNEKSDEEPREAFTTTATTKKQHPEEESDHLAKD* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0995 537 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 134 348 IPR028055 -
Amo20g0995 537 MobiDBLite consensus disorder prediction 430 505 - -
Amo20g0995 537 MobiDBLite consensus disorder prediction 506 537 - -
Amo20g0995 537 Pfam 60Kd inner membrane protein 134 348 IPR001708 GO:0016021|GO:0032977
Amo20g0995 537 MobiDBLite consensus disorder prediction 367 537 - -
Amo20g0995 537 MobiDBLite consensus disorder prediction 402 426 - -
Amo20g0995 537 PANTHER OXA1 26 469 IPR001708 GO:0016021|GO:0032977
Amo20g0995 537 PANTHER BNAA09G28180D PROTEIN 26 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0995 Amo-Chr20 17417788 17424149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0995 71 420 Chloroplast and Mitochondria Gene Families AT2G28800 56.980 1.76e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0995 K03217 - gmx:100802546 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0995 20 17417788 17424149 Amo10g0569 10 6208942 6215238 hybridization