Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0985 ATGGCTTCATTTTCTCTCTTCTTCCTTTTTACACTTCTTCTACTACCACCGTATTCTCTTTGCCAACTTCAAGAGTTTGTGAGCATTGACTGTGGTGGAACAAGCTACTACAATGATTCAACAACAGGGTTGCCATGGATTCCGGATTCTGAGATCATGAAACATGGCAAAGCTGTGGAAGTTCAAAACCCAAATGGTGGCAGCAATATGATTCCTCTTCAGTACAAGACAAGGAGGGACTTTCCAATAGACAGCAGAAAGTACTGTTACACACTGAAAACTGAGGAGAGGAGAAGGTACCTTGTCAGAGCAAGTTTTCAGTATGGGAACTTGGGAGATGGAGACACATACCCTCAATTTCTGCTCTTCTTGGATGCAACAAAATGGGCCACTGTGTCAGTCTATGATGCATCAAGGGTCTATGTGAAGGAGATGATTTTCAGAGCACCCTCAGACTCTGTTGATGTTTGCATGTGTTGTGCCACCACTGGCTCTCCATTCATATCCACACTGGAGCTTAGGCCCTTGAATGCGTCAATGTATGCCACGGAGTTCGAGGATGATTTCTTCTTGAAAGTGGCTGCAAGGATTAACTTTGGTGCTACTAGTGAGCATGCTGTCAGGTATCCAGATGATCCATATGATAGAATCTGGGATTCGGATCTCATTAAAAGACAAAACTTTCTTGTTGGGGTGGCCCCAGGCACAATTAGAATTAACACAACAAAGAACATAGATATACAGACAAGGGAATACCCTCCTGTTAAAGTGATGCAAACCGCGGTTGTAGGCACAAAACGGGTACTCAGCTACAGACTGAACCTTGAAGACTTCCCTGCCAACGCTAGAGCTTACGCATATTTTGCGGAGATCCAAGATCTTGGTAAGAACGAGACTCGAAAATTCAAATTGGAGCAACCTTATATACCTGACTATAGCAATGCAGTGGTTAACATAGCTGAGAATGCAAATGGTAGCTACACTCTATATGAACCAAGTTATATGAATGTGAGTCTGGATTTTGTTCTTTCCTTCTCCTTTGCTAAGACCAGGGATTCTACTCAAGGACCTCTTCTAAATGCAATGGAAATAAGTAAATATGTTGAAATCGCTTCCAAAACTGACAAAGAAGATGTAAATGTAATAAATGTGTTTCGCTACTTGTCTTCCGATACTGACCCAAATAATGGGGATCCCTGTGTTCCAACACCTTGGGAGTCGGTTAATTGTAGTGCAGCTACCCCTCCAAGAATCACAAAGATAAACCTGTCAAGAAGGAATGTTAAAGGTGAAATTCCACCAGAGCTCAACAACATGGAAGCATTGACAGAGTTGTGGTTAGATGGCAACTTGCTTACAGGAACACTACCTGACATGAGCAATCTTATCAATCTAAACATTGTGCATTTAGAGAACAACAAATTGACTGGTCCATTACCGTCTTACTTGGGTAGTTTGCCAAATTTGCAAGCACTGTTCATACAGAATAACTCATTTAGCGGAGAAATACCAACAGGACTATTATCTGGAAAAATCATTTTCAACTATGATAATAATCCTGAACTACATAGAGGGAACAAGAAGCATTTTCAGTTGATACTAGGAGCTTCAATTGGAATACTAGTAATATTATTACTATTATTCTTAACAAGTCTTCTGCTAATGCATAATGCACGGAGAAAGGCAGCTAAACAGAAATGTGACGAAAAAGGGATTTCCAGAGGTAGTACAAAGCCATTAACCGGATACTCATTCGGTAAGGGTGGGACTTTAATGGATGAGGGTACTGCTTACTATATTTCACTCTCGGAGTTGAAAGAAGCTACTAATAATTTTTCGAGAAAAATCGGGAAAGGGAGCTTTGGATCTGTCTACTATGGGAGAATGAAAGATGGAAAGGAGATTGCGGTTAAGACTATGACTGATCCATCCAGCCATGGGAACCAACAATTTGTGACTGAGGTAGCTCTCCTCTCAAGAATTCATCACAGAAACTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATATCAGAATATTCTTGTTTACGAGTACATGCACAATGGMACATTAAGGGATCACCTTCATGAAGGTTCGAGTCAGAAACAATTAGACTGGTTAGCACGGCTTCGGATTGCAGAAGATGCAGCGAAAGGCCTTGAATACTTGCACACAGGATGCAATCCTAGTATTATTCACCGAGATGTAAAGACGAGCAATATTCTCCTCGACATCAATATGAGAGCGAAAGTGTCAGATTTTGGACTATCAAGGTTAGCTGAAGAAGATTTGACTCATATATCAAGTGTTGCAAGAGGAACTGTAGGCTACCTGGATCCTGAGTACTATGCAAGTCAACAATTAACCGAAAAGAGTGACGTATATAGTTTTGGAGTTGTTATGCTGGAATTGATATCTGGAAGAAAGCCGGTRTCACCAGAAGATTATGGTCCTGAAATGAATATAGTTCATTGGGCAAGATCCTTAATCCAAAAAGGCGACGTGGTAAGCATCATGGATCCATCCCTGGTTGGGAATGTCAARACCGAGTCRGTTTGGAGGGTTGCTGAAATYGCCATGCAATGTGTGGAGCAACATGGTTTCTCCAGACCAAGAATGCAAGAAGTGATTTTAGCCATACAAGATGCCTCCAGGATTGAGAAAGGTTCATCAGAAAATCACCTAAAATTATCATCTTTATCTTCAGGTAGCTCAAAACCACAATCTTCAAGGAAAACATTACTTACAAGTTTTCTTGAAATTGAAACCCCTGACTTGTCACAAGGTTGTCTCCCATCAGCAAGATAA 2808 0.4085 MASFSLFFLFTLLLLPPYSLCQLQEFVSIDCGGTSYYNDSTTGLPWIPDSEIMKHGKAVEVQNPNGGSNMIPLQYKTRRDFPIDSRKYCYTLKTEERRRYLVRASFQYGNLGDGDTYPQFLLFLDATKWATVSVYDASRVYVKEMIFRAPSDSVDVCMCCATTGSPFISTLELRPLNASMYATEFEDDFFLKVAARINFGATSEHAVRYPDDPYDRIWDSDLIKRQNFLVGVAPGTIRINTTKNIDIQTREYPPVKVMQTAVVGTKRVLSYRLNLEDFPANARAYAYFAEIQDLGKNETRKFKLEQPYIPDYSNAVVNIAENANGSYTLYEPSYMNVSLDFVLSFSFAKTRDSTQGPLLNAMEISKYVEIASKTDKEDVNVINVFRYLSSDTDPNNGDPCVPTPWESVNCSAATPPRITKINLSRRNVKGEIPPELNNMEALTELWLDGNLLTGTLPDMSNLINLNIVHLENNKLTGPLPSYLGSLPNLQALFIQNNSFSGEIPTGLLSGKIIFNYDNNPELHRGNKKHFQLILGASIGILVILLLLFLTSLLLMHNARRKAAKQKCDEKGISRGSTKPLTGYSFGKGGTLMDEGTAYYISLSELKEATNNFSRKIGKGSFGSVYYGRMKDGKEIAVKTMTDPSSHGNQQFVTEVALLSRIHHRNLVPLIGYCEEEYQNILVYEYMHNGTLRDHLHEGSSQKQLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYASQQLTEKSDVYSFGVVMLELISGRKPVSPEDYGPEMNIVHWARSLIQKGDVVSIMDPSLVGNVKTESVWRVAEIAMQCVEQHGFSRPRMQEVILAIQDASRIEKGSSENHLKLSSLSSGSSKPQSSRKTLLTSFLEIETPDLSQGCLPSAR* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0985 935 PANTHER - 19 893 - -
Amo20g0985 935 Gene3D Phosphorylase Kinase; domain 1 590 685 - -
Amo20g0985 935 Pfam Protein tyrosine and serine/threonine kinase 612 877 IPR001245 GO:0004672|GO:0006468
Amo20g0985 935 Gene3D Ribonuclease Inhibitor 376 526 IPR032675 -
Amo20g0985 935 SUPERFAMILY L domain-like 401 522 - -
Amo20g0985 935 Gene3D Transferase(Phosphotransferase) domain 1 686 902 - -
Amo20g0985 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Amo20g0985 935 SUPERFAMILY Protein kinase-like (PK-like) 595 877 IPR011009 -
Amo20g0985 935 PANTHER OS07G0107800 PROTEIN-RELATED 19 893 - -
Amo20g0985 935 ProSiteProfiles Protein kinase domain profile. 610 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g0985 935 Pfam Malectin-like domain 29 366 IPR024788 -
Amo20g0985 935 ProSitePatterns Protein kinases ATP-binding region signature. 616 638 IPR017441 GO:0005524
Amo20g0985 935 CDD STKc_IRAK 616 877 - -
Amo20g0985 935 SMART serkin_6 610 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0985 Amo-Chr20 17185771 17192913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0985 11 935 Receptor kinase-like Gene Family AT1G67720 69.537 0.0 1298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo20g0985 Malectin_like 4.4e-88 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0985 - - gmx:100807148 1544.25