Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0967 ATGAATGATTCAACTTCAAATCAGTTGAATGATAACAATCTGATTTATTCTTCTGAAACAAATGATGCTGATGAGATTATATTTCGTTCACTCAGTACTCGTTCACTCAGTACCATAGAGTTGTTTTACTATGAGTACGTGTTCAGTTCGACCAGATGTGTTGTGGATGAAAAATTTGTCCCAAAGGTGGGGATGATTTTCAAGACACTAAAAGAAGCTGGAAAGTTCTACAAACTTTATTCGAAACTTGCCGATTTTTCTACCAAAATAAGGAACACGACTCGGGACGGAGACAAGATTAAGAATCAACTAATCGTATGCACCAGAGAGGGGAGGTGGAAATCCAAGATATCTCCAACTTTGAAGACAAATCCTTCAGCCGGGTTGAACTGTCCAGCCAGGATTTACGTACACATAATGAAGGATGTTGGTCTTTGGACAATTTTTAAAGTTGTTCTGAATCACTCACATCTTTACTGTCTAAATCGGGCAGAGATGCTCAAACAACAAAGGGAGCTTAGCATGTTTGTGCGTCGCACCATCGAAACCAACGAGGAAGCTGGAATTAGACCGAGCAAAACTTACCAATCATTTGTGGCAGCAGCTGGCAACCACCGTGAACTAAAGTTGTACGAGGATTGGCATATATGGATTCTAGTTTACCCGGGTCACCACTTCTAA 681 0.4053 MNDSTSNQLNDNNLIYSSETNDADEIIFRSLSTRSLSTIELFYYEYVFSSTRCVVDEKFVPKVGMIFKTLKEAGKFYKLYSKLADFSTKIRNTTRDGDKIKNQLIVCTREGRWKSKISPTLKTNPSAGLNCPARIYVHIMKDVGLWTIFKVVLNHSHLYCLNRAEMLKQQRELSMFVRRTIETNEEAGIRPSKTYQSFVAAAGNHRELKLYEDWHIWILVYPGHHF* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0967 226 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 197 - -
Amo20g0967 226 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 11 197 - -
Amo20g0967 226 Pfam FAR1 DNA-binding domain 75 157 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0967 Amo-Chr20 16488123 16490034 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g0967 FAR1 1.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0967 - - aip:107614666 291.197